| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A2448 |
|---|
| Symbol | fcl |
|---|
| ID | 6873087 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011205 |
|---|
| Strand | - |
|---|
| Start bp | 2323258 |
|---|
| End bp | 2324223 |
|---|
| Gene Length | 966 bp |
|---|
| Protein Length | 321 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 642785537 |
|---|
| Product | GDP-L-fucose synthetase |
|---|
| Protein accession | YP_002216195 |
|---|
| Protein GI | 198244795 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 48 |
|---|
| Fosmid unclonability p-value | 0.0192641 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATAAGC AACGAATTTT TGTGGCGGGC CATCGCGGGA TGGTGGGCTC CGCCATTGTA
CGGCAGCTTG CGCCGCGCGG CGACGTGGAA CTGGTGCTGC GCACCCGCGA TGAGCTGGAT
CTGCTCGACG GGCGCGCGGT ACAGGCGTTC TTTGCCGGGG CGGGTATCGA CCAGGTTTAT
CTGGCGGCGG CGAAAGTGGG CGGCATTGTC GCCAACAACA CATATCCGGC GGATTTTATC
TATGAAAACA TGATGATAGA GAGCAACATT ATTCACGCCG CGCACCTGCA CAACGTGAAC
AAACTGCTGT TTCTCGGTTC GTCCTGTATC TATCCGAAAC TGGCAAGGCA GCCGATGGCG
GAAAGCGAGC TGCTGCAGGG GACGCTGGAG CCGACCAACG AGCCGTATGC CATCGCCAAG
ATCGCCGGGA TTAAATTGTG CGAGTCCTAC AACCGGCAGT ACGGTCGCGA CTACCGTTCG
GTGATGCCAA CCAACCTGTA CGGCCCGCAT GACAATTTCC ATCCGGACAA TTCACATGTG
ATCCCGGCGC TGCTGCGCCG CTTTCATGAG GCCGCGCAGA GCCACGCGCC GGAGGTGGTG
GTGTGGGGCA GCGGCACGCC GATGCGCGAA TTTCTGCACG TTGACGATAT GGCGGCGGCC
AGCATTCACG TGATGGAGCT GGCGCGCGAA GTGTGGCAGG AGAACACCGC TCCGATGCTG
TCGCACATTA ACGTCGGCAC TGGCGTGGAC TGCACCATCC GCGAGCTGGC GCAGACTATC
GCAAAGGTGG TGGGTTACCA GGGCCGGGTG GTGTTCGACG CCACGAAGCC GGACGGCACG
CCGCGTAAAT TGCTCGACGT CACGCGCCTG CATCAGCTTG GCTGGTATCA CGAAATTTCA
CTGGAGGCAG GGCTTGCCGG TACTTACCAG TGGTTCCTTG AGAATCAGCA CCGGTTCCGG
GGGTGA
|
|---|
| Protein sequence | MNKQRIFVAG HRGMVGSAIV RQLAPRGDVE LVLRTRDELD LLDGRAVQAF FAGAGIDQVY
LAAAKVGGIV ANNTYPADFI YENMMIESNI IHAAHLHNVN KLLFLGSSCI YPKLARQPMA
ESELLQGTLE PTNEPYAIAK IAGIKLCESY NRQYGRDYRS VMPTNLYGPH DNFHPDNSHV
IPALLRRFHE AAQSHAPEVV VWGSGTPMRE FLHVDDMAAA SIHVMELARE VWQENTAPML
SHINVGTGVD CTIRELAQTI AKVVGYQGRV VFDATKPDGT PRKLLDVTRL HQLGWYHEIS
LEAGLAGTYQ WFLENQHRFR G
|
|---|
| |