| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A2429 |
|---|
| Symbol | |
|---|
| ID | 6872624 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011205 |
|---|
| Strand | - |
|---|
| Start bp | 2301703 |
|---|
| End bp | 2302542 |
|---|
| Gene Length | 840 bp |
|---|
| Protein Length | 279 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 642785519 |
|---|
| Product | paratose synthase |
|---|
| Protein accession | YP_002216177 |
|---|
| Protein GI | 198241942 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.417691 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 0.0000951168 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATTC TAATAATGGG AGCGTTTGGG TTCCTTGGAT CACGACTTAC ATCCTACTTC
GAAAGTCGAC ATACTGTGAT TGGCTTAGCA AGGAAGAGGA ACAATGAAGC TACCATAAAT
AATATTATTT ACACGACAGA AAATAATTGG ATCGAAAAAA TAGTAGAATT TGAACCGAAT
ATTATTATTA ACACTATTGC TTGCTATGGA AGACATAACG AACCTGCAAC AGCTTTAATA
GAAAGCAATA TTCTTATGCC TATCAGAGTA TTAGAATCTA TCTCATCACT TGATGCAGTA
TTCATAAATT GTGGAACATC ACTGCCACCA AATACGAGTT TATATGCATA TACTAAACAA
AAAGCAAATG AACTCGCCGC CGCCATTATA GATAAAGTTT GTGGTAAATA TATAGAGTTA
AAATTGGAGC ATTTCTATGG AGCTTTTGAT GGAGACGATA AGTTTACCAG TATGGTTATT
AGACGTTGTT TAAGTAACCA GCCAGTAAAG TTAACATCTG GTTTGCAACA GAGAGATTTC
TTGTATATAA AAGATCTACT AACAGCGTTC GATTGTATTA TAAATAATGT TAATAATTTC
CCCAAATTTC ATAGTATTGA AGTTGGTAGT GGAAAGGCTA TATCAATTCG TGAATATGTA
GAGACTGTTA AAAATATCAC AAAAAGCAAT TCTATAATTG AATTTGGTGT GGTCAAAGAA
AGAGCCAATG AATTGATGTA TAGTTGTGCT GATATAGCAG AACTTGAAAA AATAGGATGG
AAAAGAGAGT TCTCTCTTGT TGATGCATTA ACTGAAATAA TTGAAGAGGA AGGGAAATGA
|
|---|
| Protein sequence | MKILIMGAFG FLGSRLTSYF ESRHTVIGLA RKRNNEATIN NIIYTTENNW IEKIVEFEPN
IIINTIACYG RHNEPATALI ESNILMPIRV LESISSLDAV FINCGTSLPP NTSLYAYTKQ
KANELAAAII DKVCGKYIEL KLEHFYGAFD GDDKFTSMVI RRCLSNQPVK LTSGLQQRDF
LYIKDLLTAF DCIINNVNNF PKFHSIEVGS GKAISIREYV ETVKNITKSN SIIEFGVVKE
RANELMYSCA DIAELEKIGW KREFSLVDAL TEIIEEEGK
|
|---|
| |