Gene SeD_A2428 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A2428 
Symbol 
ID6872226 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand- 
Start bp2300690 
End bp2301706 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content35% 
IMG OID642785518 
ProductCDP-paratose 2-epimerase 
Protein accessionYP_002216176 
Protein GI198243307 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1088] dTDP-D-glucose 4,6-dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones8 
Plasmid unclonability p-value0.597931 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value0.000207654 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAGCTTT TAATTACCGG TGGATGTGGC TTTCTTGGGA GTAATCTTGC CTCCTTTGCT 
TTAAGTCAAG GGATTGATTT AATTGTATTC GATAATCTAT CACGTAAAGG TGCAACAGAT 
AATTTACATT GGTTATCCTC CTTAGGAAAC TTTGAGTTTG TACATGGTGA TATTCGCAAC 
AAAAATGATG TTACAAGATT AATAACTAAG TATATGCCTG ATAGCTGTTT TCATCTTGCA 
GGTCAAGTGG CAATGACTAC ATCTATTGAC AATCCTTGTA TGGATTTTGA AATTAATGTA 
GGTGGAACTT TAAATTTACT TGAGGCAGTA CGGCAGTATA ATTCAAATTG TAATATAATT 
TATTCATCAA CAAATAAAGT ATACGGCGAT CTTGAGCAAT ATAAATACAA TGAAACAGAA 
ACTAGATATA CTTGTATAGA TAAGCCTAAT GGATATGATG AGAGCACACA ATTAGATTTC 
CACTCACCAT ATGGTTGTTC AAAAGGTGCT GCAGATCAAT ACATGCTTGA TTATGCAAGG 
ATTTTTGGTT TGAATACAGT GGTGTTCAGG CATTCATCAA TGTATGGTGG GAGACAGTTT 
GCTACTTATG ATCAAGGCTG GGTAGGTTGG TTTTGTCAAA AAGCGGTTGA AATTAAAAAT 
GGTATTAACA AACCCTTCAC TATTTCTGGT AATGGTAAGC AAGTTAGGGA TGTTTTGCAT 
GCTGAAGATA TGATTTCGTT ATATTTCACT GCCTTGGCAA ATGTATCAAA AATTAGGGGG 
AACGCTTTTA ATATTGGTGG TACCATTGTC AACAGCCTAT CATTACTTGA ATTATTCAAA 
TTGCTTGAAG ATTATTGCAA CATTGATATG AGGTTCACTA ATTTACCAGT AAGGGAAAGT 
GATCAGCGTG TTTTTGTTGC AGATATTAAA AAAATCACTA ATGCAATTGA CTGGAGCCCG 
AAAGTCTCGG CAAAAGATGG TGTCCAGAAA ATGTATGATT GGACTAGTTC TATATGA
 
Protein sequence
MKLLITGGCG FLGSNLASFA LSQGIDLIVF DNLSRKGATD NLHWLSSLGN FEFVHGDIRN 
KNDVTRLITK YMPDSCFHLA GQVAMTTSID NPCMDFEINV GGTLNLLEAV RQYNSNCNII 
YSSTNKVYGD LEQYKYNETE TRYTCIDKPN GYDESTQLDF HSPYGCSKGA ADQYMLDYAR 
IFGLNTVVFR HSSMYGGRQF ATYDQGWVGW FCQKAVEIKN GINKPFTISG NGKQVRDVLH 
AEDMISLYFT ALANVSKIRG NAFNIGGTIV NSLSLLELFK LLEDYCNIDM RFTNLPVRES 
DQRVFVADIK KITNAIDWSP KVSAKDGVQK MYDWTSSI