Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A2424 |
Symbol | |
ID | 6875120 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | - |
Start bp | 2295737 |
End bp | 2296681 |
Gene Length | 945 bp |
Protein Length | 314 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 642785514 |
Product | putative O antigen biosynthesis rhamnosyltransferase |
Protein accession | YP_002216172 |
Protein GI | 198245791 |
COG category | [R] General function prediction only |
COG ID | [COG1216] Predicted glycosyltransferases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.126367 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 0.000645643 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAAATAA CATTAATTAT TCCCACATAT AATGCAGGGT CGCTTTGGCC TAATGTTCTG GATGCGATTA AGCAGCAAAC TATATATCCG GATAAATTGA TTGTTATAGA CTCAGGTTCT AAAGATGAAA CGGTTCCGTT AGCCTCAGAC CTGAAAAATA TATCAATATT TAATATTGAC TCTAAAGATT TTAATCATGG AGGAACCAGA AATTTAGCAG TTGCAAAAAC TCTGGACGCT GATGTTATAA TTTTTCTAAC GCAAGATGCA ATTCTCGCGG ATTCGGATGC AATTAAAAAT TTGGTTTATT ATTTTTCAGA TCCATTGATA GCAGCGGTTT GTGGTAGACA ACTTCCTCAT AAAGATGCTA ATCCCCTTGC AGTGCATGCC AGAAATTTTA ATTATAGTTC AAAATCTATT GTTAAAAGTA AGGCAGATAT AGAAAAATTG GGTATTAAAA CTGTATTTAT GTCCAATTCT TTTGCTGCCT ATCGCCGTTC CGTTTTTGAA GAGTTAAGTG GGTTTCCTGA ACATACAATT CTTGCCGAGG ATATGTTTAT GGCGGCTAAG ATGATTCAGG CGGGTTATAA GGTCGCCTAC TGCGCTGAAG CGGTGGTAAG ACACTCCCAT AATTATACCC CGCGAGAAGA GTTTCAACGA TATTTTGATA CTGGTGTATT TCATGCTTGT TCTCCGTGGA TTCAGCGTGA CTTTGGCGGA GCCGGTGGTG AGGGTTTCCG CTTCGTAAAA TCAGAGATTC AATTCCTGCT TAAAAATGCA CCGTTCTGGA TTCCAAGAGC TTTATTAACA ACCTTTGCTA AATTCTTGGG TTACAAATTA GGCAAGCATT GGCAATCTTT ACCGTTGTCT ACATGTCGCT ATTTTAGCAT GTACAAGAGT TATTGGAATA ATATCCAATA TTCTTCGTCA AAAGAGATAA AATAA
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Protein sequence | MKITLIIPTY NAGSLWPNVL DAIKQQTIYP DKLIVIDSGS KDETVPLASD LKNISIFNID SKDFNHGGTR NLAVAKTLDA DVIIFLTQDA ILADSDAIKN LVYYFSDPLI AAVCGRQLPH KDANPLAVHA RNFNYSSKSI VKSKADIEKL GIKTVFMSNS FAAYRRSVFE ELSGFPEHTI LAEDMFMAAK MIQAGYKVAY CAEAVVRHSH NYTPREEFQR YFDTGVFHAC SPWIQRDFGG AGGEGFRFVK SEIQFLLKNA PFWIPRALLT TFAKFLGYKL GKHWQSLPLS TCRYFSMYKS YWNNIQYSSS KEIK
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