Gene SeD_A2420 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A2420 
Symbolgnd 
ID6874665 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp2289806 
End bp2291212 
Gene Length1407 bp 
Protein Length468 aa 
Translation table11 
GC content52% 
IMG OID642785510 
Product6-phosphogluconate dehydrogenase 
Protein accessionYP_002216168 
Protein GI198242320 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0362] 6-phosphogluconate dehydrogenase 
TIGRFAM ID[TIGR00873] 6-phosphogluconate dehydrogenase, decarboxylating 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.511918 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value0.0040278 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCCAAGC AACAGATCGG CGTCGTCGGT ATGGCAGTGA TGGGGCGCAA CCTCGCGCTC 
AACATCGAAA GCCGTGGTTA TACCGTCTCC GTTTTCAACC GCTCCCGTGA AAAGACCGAA
GAAGTGATTG CCGAGAATCC CGGCAAAAAG CTGGTGCCTT ATTACACGGT GAAAGAGTTT
GTTGAATCCC TCGAAACGCC TCGTCGTATC CTGTTAATGG TGAAAGCGGG TGCAGGTACT
GATGCAGCTA TCGATTCGCT GAAACCGTAT CTGGAAAAAG GCGATATCAT TATTGATGGC
GGTAACACCT TCTTCCAGGA CACAATCCGT CGCAATCGCG AGCTGTCTGC GGAAGGTTTT
AACTTTATCG GTACCGGTGT TTCCGGTGGT GAAGAGGGCG CGCTGAAAGG GCCATCTATC
ATGCCTGGCG GTCAGAAAGA TGCCTATGAA CTGGTGGCGC CGATCCTGAC GAAGATTGCT
GCTGTGGCGG AAGATGGCGA ACCGTGCGTG ACCTATATCG GCGCCGATGG TGCTGGTCAC
TACGTCAAGA TGGTCCACAA TGGTATTGAA TATGGCGATA TGCAGCTTAT CGCTGAAGCT
TACTCCCTGC TGAAAGGCGG CCTGAATCTC AGCAATGAAG AGTTGGCGAA CACTTTTACT
GAGTGGAATA ACGGCGAGCT GAGCAGCTAT CTGATCGACA TCACTAAAGA CATCTTCACT
AAAAAAGATG AAGACGGAAA CTACCTGGTG GATGTCATTC TTGATGAAGC CGCCAACAAA
GGGACCGGTA AATGGACCAG CCAGAGCGCG CTGGATCTGG GTGAACCGCT GTCGCTGATT
ACCGAATCCG TCTTTGCGCG TTACATCTCT TCGTTGAAAG CGCAACGTGT TGCCGCATCT
AAAGTGCTCT CCGGGCCGAA AGCGCAGCCG GCAGGCGACA AAGCTGAATT TATCGAGAAA
GTGCGTCGCG CGCTGTATCT TGGCAAGATC GTCTCCTATG CGCAGGGCTT CTCGCAGCTA
CGCGCCGCGT CTGATGAATA TCACTGGGAT CTCAACTACG GCGAGATTGC TAAGATTTTC
CGTGCGGGCT GTATCATTCG CGCTCAGTTT CTGCAGAAGA TCACTGATGC TTACGCAGAA
AACGCCGGTA TCGCTAACTT GCTGTTAGCG CCTTACTTCA AGAAAATTGC TGATGAGTAC
CAGCAGGCGC TGCGTGATGT CGTGGCTTAC GCGGTGCAGA ACGGCATTCC GGTGCCGACA
TTCTCTGCGG CAGTGGCCTA CTATGACAGC TATCGCGCCG CAGTACTGCC AGCTAACTTA
ATTCAGGCGC AGCGTGACTA CTTTGGTGCG CACACCTATA AACGTACTGA TAAAGAAGGC
ATTTTCCATA CCGAATGGTT GGAATAA
 
Protein sequence
MSKQQIGVVG MAVMGRNLAL NIESRGYTVS VFNRSREKTE EVIAENPGKK LVPYYTVKEF 
VESLETPRRI LLMVKAGAGT DAAIDSLKPY LEKGDIIIDG GNTFFQDTIR RNRELSAEGF
NFIGTGVSGG EEGALKGPSI MPGGQKDAYE LVAPILTKIA AVAEDGEPCV TYIGADGAGH
YVKMVHNGIE YGDMQLIAEA YSLLKGGLNL SNEELANTFT EWNNGELSSY LIDITKDIFT
KKDEDGNYLV DVILDEAANK GTGKWTSQSA LDLGEPLSLI TESVFARYIS SLKAQRVAAS
KVLSGPKAQP AGDKAEFIEK VRRALYLGKI VSYAQGFSQL RAASDEYHWD LNYGEIAKIF
RAGCIIRAQF LQKITDAYAE NAGIANLLLA PYFKKIADEY QQALRDVVAY AVQNGIPVPT
FSAAVAYYDS YRAAVLPANL IQAQRDYFGA HTYKRTDKEG IFHTEWLE