Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A2420 |
Symbol | gnd |
ID | 6874665 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | - |
Start bp | 2289806 |
End bp | 2291212 |
Gene Length | 1407 bp |
Protein Length | 468 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 642785510 |
Product | 6-phosphogluconate dehydrogenase |
Protein accession | YP_002216168 |
Protein GI | 198242320 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0362] 6-phosphogluconate dehydrogenase |
TIGRFAM ID | [TIGR00873] 6-phosphogluconate dehydrogenase, decarboxylating |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.511918 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 0.0040278 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTCCAAGC AACAGATCGG CGTCGTCGGT ATGGCAGTGA TGGGGCGCAA CCTCGCGCTC AACATCGAAA GCCGTGGTTA TACCGTCTCC GTTTTCAACC GCTCCCGTGA AAAGACCGAA GAAGTGATTG CCGAGAATCC CGGCAAAAAG CTGGTGCCTT ATTACACGGT GAAAGAGTTT GTTGAATCCC TCGAAACGCC TCGTCGTATC CTGTTAATGG TGAAAGCGGG TGCAGGTACT GATGCAGCTA TCGATTCGCT GAAACCGTAT CTGGAAAAAG GCGATATCAT TATTGATGGC GGTAACACCT TCTTCCAGGA CACAATCCGT CGCAATCGCG AGCTGTCTGC GGAAGGTTTT AACTTTATCG GTACCGGTGT TTCCGGTGGT GAAGAGGGCG CGCTGAAAGG GCCATCTATC ATGCCTGGCG GTCAGAAAGA TGCCTATGAA CTGGTGGCGC CGATCCTGAC GAAGATTGCT GCTGTGGCGG AAGATGGCGA ACCGTGCGTG ACCTATATCG GCGCCGATGG TGCTGGTCAC TACGTCAAGA TGGTCCACAA TGGTATTGAA TATGGCGATA TGCAGCTTAT CGCTGAAGCT TACTCCCTGC TGAAAGGCGG CCTGAATCTC AGCAATGAAG AGTTGGCGAA CACTTTTACT GAGTGGAATA ACGGCGAGCT GAGCAGCTAT CTGATCGACA TCACTAAAGA CATCTTCACT AAAAAAGATG AAGACGGAAA CTACCTGGTG GATGTCATTC TTGATGAAGC CGCCAACAAA GGGACCGGTA AATGGACCAG CCAGAGCGCG CTGGATCTGG GTGAACCGCT GTCGCTGATT ACCGAATCCG TCTTTGCGCG TTACATCTCT TCGTTGAAAG CGCAACGTGT TGCCGCATCT AAAGTGCTCT CCGGGCCGAA AGCGCAGCCG GCAGGCGACA AAGCTGAATT TATCGAGAAA GTGCGTCGCG CGCTGTATCT TGGCAAGATC GTCTCCTATG CGCAGGGCTT CTCGCAGCTA CGCGCCGCGT CTGATGAATA TCACTGGGAT CTCAACTACG GCGAGATTGC TAAGATTTTC CGTGCGGGCT GTATCATTCG CGCTCAGTTT CTGCAGAAGA TCACTGATGC TTACGCAGAA AACGCCGGTA TCGCTAACTT GCTGTTAGCG CCTTACTTCA AGAAAATTGC TGATGAGTAC CAGCAGGCGC TGCGTGATGT CGTGGCTTAC GCGGTGCAGA ACGGCATTCC GGTGCCGACA TTCTCTGCGG CAGTGGCCTA CTATGACAGC TATCGCGCCG CAGTACTGCC AGCTAACTTA ATTCAGGCGC AGCGTGACTA CTTTGGTGCG CACACCTATA AACGTACTGA TAAAGAAGGC ATTTTCCATA CCGAATGGTT GGAATAA
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Protein sequence | MSKQQIGVVG MAVMGRNLAL NIESRGYTVS VFNRSREKTE EVIAENPGKK LVPYYTVKEF VESLETPRRI LLMVKAGAGT DAAIDSLKPY LEKGDIIIDG GNTFFQDTIR RNRELSAEGF NFIGTGVSGG EEGALKGPSI MPGGQKDAYE LVAPILTKIA AVAEDGEPCV TYIGADGAGH YVKMVHNGIE YGDMQLIAEA YSLLKGGLNL SNEELANTFT EWNNGELSSY LIDITKDIFT KKDEDGNYLV DVILDEAANK GTGKWTSQSA LDLGEPLSLI TESVFARYIS SLKAQRVAAS KVLSGPKAQP AGDKAEFIEK VRRALYLGKI VSYAQGFSQL RAASDEYHWD LNYGEIAKIF RAGCIIRAQF LQKITDAYAE NAGIANLLLA PYFKKIADEY QQALRDVVAY AVQNGIPVPT FSAAVAYYDS YRAAVLPANL IQAQRDYFGA HTYKRTDKEG IFHTEWLE
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