Gene SeD_A2418 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A2418 
Symbol 
ID6873632 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp2288402 
End bp2289568 
Gene Length1167 bp 
Protein Length388 aa 
Translation table11 
GC content44% 
IMG OID642785508 
Productudp-glucose 6-dehydrogenase 
Protein accessionYP_002216166 
Protein GI198245698 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1004] Predicted UDP-glucose 6-dehydrogenase 
TIGRFAM ID[TIGR03026] nucleotide sugar dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value0.00233828 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAAATCA CGATATCCGG GACGGGTTAT GTTGGCTTGT CTAATGGTTT GCTTATTGCA 
CAACATCATG ATGTGGTGGC GTTAGACATT GTTCCTTCCC GTGTTGAACT GTTAAATGAT
CGGATATCTC CGATTGTTGA TAAAGAAATT CAGCAATTTT TAAAGGAAGA TAACATCAGA
TTCAGGGCAA CGCTGGATAA GTTTGATGCG TACCAGAATG CAGATTACGT CATCATTGCT
ACGCCTACGG ATTACGATCC CAAAACCAAC TATTTTAATA CGTCCAGTGT GGAATCGGTC
ATTCAGGATG TGATCAGCAT CAACCCCGCA GCCGTGATGA TTATTAAGTC TACGGTGCCG
GTTGGCTTCA CGGCGGCAAT GCGTCAGAAG TTTGCGACAG AAAATATCAT TTTCTCTCCG
GAGTTTTTAC GTGAAGGTAA AGCCCTTTAC GATAACCTTT ATCCCTCCCG TATCGTGATT
GGGGAACAGT CTGAGCGCGC CAGAGAATTT GCCGCATTAC TCCAGGAAGG CGCTATTAAA
CAGGAGATTC CAACGCTGTT TACGGACTCC ACTGAGGCGG AAGCTATTAA ACTTTTCGCC
AATACTTATC TCGCTATGCG AGTCGCTTAT TTTAATGAAT TAGACAGCTA TGCTGAAACG
TTAGGATTAA ATACCCGACA AATTATTGAA GGGGTGTGCC TCGACCCGCG TATTGGCAAT
CATTATAATA ATCCCTCTTT TGGTTATGGC GGATATTGTT TGCCAAAAGA TACCAAACAG
TTGCTGGCCA ATTATCAGTC GGTGCCTAAT AATATTATCT CCGCTATCGT TGAAGCAAAC
CGTACGCGTA AAGATTTTAT TGCCGACGCT ATCCTCGCCA GAAAGCCTAA AGTGGTGGGC
ATTTATCGCC TGATTATGAA GAGTGGCTCC GATAACTTCC GCGCCTCATC GATTCAGGGG
ATTATGAAGC GCATTAAAGC GAAAGGCGTA GAGGTCATCA TCTATGAGCC GGTAATGGAA
GAAGATACTT TCTTTAACTC ACGTCTTGAA CGTGATTTGC ACTGCTTTAA ACAGCAGGCG
GATGTCATTA TTTCCAACAG GATGGCGGCA GAGCTTTTGG ATGTCGCTGA AAAAGTGTAT
ACCCGCGATC TTTTCGGTAG TGATTAA
 
Protein sequence
MKITISGTGY VGLSNGLLIA QHHDVVALDI VPSRVELLND RISPIVDKEI QQFLKEDNIR 
FRATLDKFDA YQNADYVIIA TPTDYDPKTN YFNTSSVESV IQDVISINPA AVMIIKSTVP
VGFTAAMRQK FATENIIFSP EFLREGKALY DNLYPSRIVI GEQSERAREF AALLQEGAIK
QEIPTLFTDS TEAEAIKLFA NTYLAMRVAY FNELDSYAET LGLNTRQIIE GVCLDPRIGN
HYNNPSFGYG GYCLPKDTKQ LLANYQSVPN NIISAIVEAN RTRKDFIADA ILARKPKVVG
IYRLIMKSGS DNFRASSIQG IMKRIKAKGV EVIIYEPVME EDTFFNSRLE RDLHCFKQQA
DVIISNRMAA ELLDVAEKVY TRDLFGSD