Gene SeD_A2417 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A2417 
Symbol 
ID6874206 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp2287276 
End bp2288259 
Gene Length984 bp 
Protein Length327 aa 
Translation table11 
GC content51% 
IMG OID642785507 
Productchain length determinant protein 
Protein accessionYP_002216165 
Protein GI198244259 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3765] Chain length determinant protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value0.0117622 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGTGG ATAGTAATAC GTCTTCCGGG CGTGGGAACG ATCCGGAACA GATTGATTTG 
ATTGAGTTAT TGCTACAGTT ATGGCGTGGG AAGATGACCA TTATTGTAGC CGTTATTATC
GCCATTTTGC TGGCTGTAGG CTACCTGATG ATAGCCAAAG AAAAATGGAC ATCCACGGCG
ATTATTACCC AACCTGATGC CGCGCAGGTT GCCACCTATA CCAACGCGCT CAACGTCTTG
TATGGTGGGA ATGCCCCCAA AATCTCTGAA GTGCAGGCGA ATTTTATAAG CCGCTTTAGC
TCTGCGTTTT CCGCATTATC GGAAGTGCTG GATAATCAGA AAGAGCGGGA AAAGCTTACC
ATTGAACAGT CGGTAAAAGG GCAGGCGCTG CCACTCTCGG TTTCTTATGT GAGTACTACC
GCTGAAGGGG CGCAGCGTCG GCTGGCGGAA TATATCCAAC AGGTGGATGA AGAGGTCGCT
AAGGAACTGG AAGTTGACCT GAAAGATAAC ATCACGCTGC AAACCAAAAC GTTGCAGGAG
TCCCTTGAGA CGCAGGAAGT TGTGGCGCAG GAGCAAAAAG ATCTGCGTAT TAAGCAAATC
GAAGAAGCGT TGCGCTATGC GGATGAGGCC AAAATCACGC AGCCGCAGAT TCAGCAAACC
CAGGATGTTA CCCAGGACAC GATGTTCCTG TTGGGGAGCG ATGCGCTAAA ATCGATGATA
CAGAACGAAG CGACGCGTCC ACTGGTCTTT TCTCCGGCCT ATTACCAGAC GAAGCAGACA
CTGCTGGACA TTAAAAATCT GAAAGTGACT GCCGATACGG TGCACGTCTA TCGTTATGTG
ATGAAGCCGA CGCTGCCGGT CCGTCGCGAT AGCCCGAAAA CAGCCATTAC CCTCGTGCTG
GCTGTATTGC TGGGTGGGAT GATCGGTGCC GGGATTGTGC TGGGACGCAA TGCGCTACGT
AGCTATAAGC CAAAAGCCTT GTAA
 
Protein sequence
MTVDSNTSSG RGNDPEQIDL IELLLQLWRG KMTIIVAVII AILLAVGYLM IAKEKWTSTA 
IITQPDAAQV ATYTNALNVL YGGNAPKISE VQANFISRFS SAFSALSEVL DNQKEREKLT
IEQSVKGQAL PLSVSYVSTT AEGAQRRLAE YIQQVDEEVA KELEVDLKDN ITLQTKTLQE
SLETQEVVAQ EQKDLRIKQI EEALRYADEA KITQPQIQQT QDVTQDTMFL LGSDALKSMI
QNEATRPLVF SPAYYQTKQT LLDIKNLKVT ADTVHVYRYV MKPTLPVRRD SPKTAITLVL
AVLLGGMIGA GIVLGRNALR SYKPKAL