Gene SeD_A2373 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A2373 
Symbol 
ID6874000 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp2245950 
End bp2246744 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content51% 
IMG OID642785464 
Productpropanediol diffusion facilitator 
Protein accessionYP_002216122 
Protein GI198243781 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0580] Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) 
TIGRFAM ID[TIGR00861] MIP family channel proteins 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0974119 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones79 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGATT CTCTAAAGGC GCAATGTGGT GCGGAATTTT TAGGCACCGG ACTCTTTTTG 
TTTTTTGGTA TCGGTTGTTT GAGCGCGCTC AAAGTCGCAG GCGCCAGCCT CGGATTATGG
GAGATTTGCA TTATTTGGGG GCTTGGAATT TCACTGGCCG TTTACCTTAC TGCCGGAATC
TCCGGCGGAC ATCTTAACCC TGCGGTGACG ATTGCGCTGT GGCTGTTTGC CTGCTTTCCC
AAACAGAAAG TATTGCCTTA TATTATTGCC CAGTTTGCCG GCGCTTTTGG CGGCGCTCTG
CTGGCGTATG TGCTTTATAG TAGCCTTTTT ACTGAATTTG AGACTGCGCA TCATATGGTG
CGCGGTAGCG TCGAAAGTTT GCAATTAGCC AGCATTTTCA GTACCTATCC GGCCGCAGCG
CTAAATGTAT GGCAGGCTGC GTTGGTGGAA GTGGTCATTA CGTCGATTCT GATGGGCATG
ATCATGGCAT TGACGGATGA TGGCAATGGC ATTCCTAAAG GGCCGCTTGC GCCTTTGCTT
ATTGGGATAT TGGTTGCCGT TATCGGCGCG TCTACTGGAC CCCTTACCGG TTTTGCAATG
AACCCGGCGC GTGATTTCGG TCCCAAACTG TTCACATGGT TAGCGGGGTG GGGGAACATG
GCGATGAGCG GTGGGCGAGA GATCCCTTAT TTTATCGTGC CGATTGTCGC GCCTGTTATC
GGCGCCTGTG CCGGAGCAGC CATATATCGC TATTTTATTG GTAAGAATTT ACCTTGTAAC
CGCTGTGAAC TGTAA
 
Protein sequence
MNDSLKAQCG AEFLGTGLFL FFGIGCLSAL KVAGASLGLW EICIIWGLGI SLAVYLTAGI 
SGGHLNPAVT IALWLFACFP KQKVLPYIIA QFAGAFGGAL LAYVLYSSLF TEFETAHHMV
RGSVESLQLA SIFSTYPAAA LNVWQAALVE VVITSILMGM IMALTDDGNG IPKGPLAPLL
IGILVAVIGA STGPLTGFAM NPARDFGPKL FTWLAGWGNM AMSGGREIPY FIVPIVAPVI
GACAGAAIYR YFIGKNLPCN RCEL