Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A2373 |
Symbol | |
ID | 6874000 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | - |
Start bp | 2245950 |
End bp | 2246744 |
Gene Length | 795 bp |
Protein Length | 264 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 642785464 |
Product | propanediol diffusion facilitator |
Protein accession | YP_002216122 |
Protein GI | 198243781 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0580] Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) |
TIGRFAM ID | [TIGR00861] MIP family channel proteins |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0974119 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 79 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATGATT CTCTAAAGGC GCAATGTGGT GCGGAATTTT TAGGCACCGG ACTCTTTTTG TTTTTTGGTA TCGGTTGTTT GAGCGCGCTC AAAGTCGCAG GCGCCAGCCT CGGATTATGG GAGATTTGCA TTATTTGGGG GCTTGGAATT TCACTGGCCG TTTACCTTAC TGCCGGAATC TCCGGCGGAC ATCTTAACCC TGCGGTGACG ATTGCGCTGT GGCTGTTTGC CTGCTTTCCC AAACAGAAAG TATTGCCTTA TATTATTGCC CAGTTTGCCG GCGCTTTTGG CGGCGCTCTG CTGGCGTATG TGCTTTATAG TAGCCTTTTT ACTGAATTTG AGACTGCGCA TCATATGGTG CGCGGTAGCG TCGAAAGTTT GCAATTAGCC AGCATTTTCA GTACCTATCC GGCCGCAGCG CTAAATGTAT GGCAGGCTGC GTTGGTGGAA GTGGTCATTA CGTCGATTCT GATGGGCATG ATCATGGCAT TGACGGATGA TGGCAATGGC ATTCCTAAAG GGCCGCTTGC GCCTTTGCTT ATTGGGATAT TGGTTGCCGT TATCGGCGCG TCTACTGGAC CCCTTACCGG TTTTGCAATG AACCCGGCGC GTGATTTCGG TCCCAAACTG TTCACATGGT TAGCGGGGTG GGGGAACATG GCGATGAGCG GTGGGCGAGA GATCCCTTAT TTTATCGTGC CGATTGTCGC GCCTGTTATC GGCGCCTGTG CCGGAGCAGC CATATATCGC TATTTTATTG GTAAGAATTT ACCTTGTAAC CGCTGTGAAC TGTAA
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Protein sequence | MNDSLKAQCG AEFLGTGLFL FFGIGCLSAL KVAGASLGLW EICIIWGLGI SLAVYLTAGI SGGHLNPAVT IALWLFACFP KQKVLPYIIA QFAGAFGGAL LAYVLYSSLF TEFETAHHMV RGSVESLQLA SIFSTYPAAA LNVWQAALVE VVITSILMGM IMALTDDGNG IPKGPLAPLL IGILVAVIGA STGPLTGFAM NPARDFGPKL FTWLAGWGNM AMSGGREIPY FIVPIVAPVI GACAGAAIYR YFIGKNLPCN RCEL
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