Gene SeD_A2372 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A2372 
Symbol 
ID6874542 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand- 
Start bp2244822 
End bp2245733 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content46% 
IMG OID642785463 
Productregulatory protein PocR 
Protein accessionYP_002216121 
Protein GI198244604 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG4936] Predicted sensor domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.740068 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones78 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTTCTG CGAGCGCTCT GAACTCAGAA CTCATTAATA AAATCGCACA GGATTTTGCA 
CAAGCCACCG GTCTGGCGGT TGTGGTTGTC AATATTCATG GTGATGAAAT ATCTGAGCTA 
TTCAATTTCA CGCCGTTTTG TCAGTTGATG CGGCAGCATC CCCAGCATAG TACACGTTGT 
CGTATGAGCG ATCGCTGCGG GGGACTGGAG GCATCGAAGT CCGATCAACC CTGTATTTAT 
CGTTGTCATG CCGGTCTAAC GGATTTTTCT ATTCCGCTGG TAATCGCAGG GCATTTAGTT 
GGCTTTGTTT TATGCGGGCA GGTTCGTTTA AGTAATGACG TGGAGCTGGT AAACATTCTT 
AATGTTGACG ATCGCTGGCA GGCTGACCCT GAGCTCTTGA ATGAATTTCG GAATGTGCCA 
GAGATGGACT ATTCACGCGT TATCGCTTCC GCCGATCTTC TTAAACTGAT TGTTGAGAAT 
TGCCTGAAAA AACAGCTCAA TTTCGTGGTT ATCAAAGACA ATCCGCAGCA ATCGGAGGCA 
AATAAAACCA CTCGTGGTCC CACTCCGCAT GACAGTAAAA TGAAAAAAGC GCTTCGCTAT 
ATTGATGCGC ATTTGTCCGA CGATCTTCGT CTTGAGGATG TCGCCTCACA TGTCTATCTC 
AGCCCCTATT ACTTCAGTAA GCTATTCAAG AAATATCAGG GAATCGGATT TAATGCGTGG 
GTAAACCGCC AGAGAATGGT TAGCGCCAGA GAATTGCTTT GCCATAGTGA CTGGAGTATT 
GCCAGTATTG CGCGTAATTT AGGCTTTTCG CAAACCAGCT ATTTTTGCAA AGTCTTCCGC 
CAGACCTATC AGGTTACGCC GCAGGCTTAT CGCCAGCAGA TAAATGAGAA TTCTCATCCT 
CCATCGTTAT GA
 
Protein sequence
MISASALNSE LINKIAQDFA QATGLAVVVV NIHGDEISEL FNFTPFCQLM RQHPQHSTRC 
RMSDRCGGLE ASKSDQPCIY RCHAGLTDFS IPLVIAGHLV GFVLCGQVRL SNDVELVNIL 
NVDDRWQADP ELLNEFRNVP EMDYSRVIAS ADLLKLIVEN CLKKQLNFVV IKDNPQQSEA 
NKTTRGPTPH DSKMKKALRY IDAHLSDDLR LEDVASHVYL SPYYFSKLFK KYQGIGFNAW 
VNRQRMVSAR ELLCHSDWSI ASIARNLGFS QTSYFCKVFR QTYQVTPQAY RQQINENSHP 
PSL