| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A2367 |
|---|
| Symbol | cbiD |
|---|
| ID | 6875346 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011205 |
|---|
| Strand | - |
|---|
| Start bp | 2240107 |
|---|
| End bp | 2241246 |
|---|
| Gene Length | 1140 bp |
|---|
| Protein Length | 379 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 642785459 |
|---|
| Product | cobalt-precorrin-6A synthase |
|---|
| Protein accession | YP_002216117 |
|---|
| Protein GI | 198244958 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG1903] Cobalamin biosynthesis protein CbiD |
|---|
| TIGRFAM ID | [TIGR00312] cobalamin biosynthesis protein CbiD |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 74 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGAGC TTTCTTTTGA CGCGCCGGTC TGGCACCACG GTAAAGCGTT ACGTAAAGGA
TATACCACCG GTTCCTGCGC GACGGCGGCG GCAAAAGTCG CCGCGCTGAT GGTATTACGT
CAACATCTGA TTCATCAGGT CTCCATCGTC ACGCCGTCGG GCGTCACGCT ATGCCTGAAC
GTGGAGTCGC CGCACATTGA AGGCCAGCAG GCGATAGCCG CAATTCGTAA AGATGGCGGC
GATGACGTGG ATGCCACGCA CGGAATGCTG ATTTTTGCCC GCGTTACGCT CAACGACAGC
GGTGAGATTA CGCTCACTGG CGGCGAAGGT ATTGGTACGG TAACGCGTAA AGGGATTGGA
CTGCCGCTCG GGAGCGCCGC CATCAATCGT ACGCCGCGCC ATACCATTGA GTCAGCGGTG
CGCGAAGCGA TAGGCCCGGC GCGTGGGGCC GATGTGGAGA TTTTTGCCCC GGAAGGCGAA
GTGCGGGCGC AAAAAACGTA TAACTCGCGG CTTGGCATCC TTGGCGGCAT TTCCATTATT
GGCACTACCG GCATTGTGAC GCCGATGTCG GAAGAAAGCT GGAAACGCTC ACTATCGCTG
GAACTGGAGA TCAAACGGGC GTCAGGATTA ACGCGGGTGA TACTCGTGCC GGGCAACCAC
GGCGAACGGT TTGTTCGCGA ACAAATGGGC GTCGACACAC AGGCAGTCGT CACCATGAGC
AATTTTGTCG GCTACATGAT TGAAGAGGCG GTACGGCTGG GATTTTGCCA GATAGTGCTG
GTGGGGCATC CTGGAAAACT GATCAAAATC GCCGCCGGGA TCTTTCATAC CCATAGCCAT
ATTGCCGATG CGCGCATGGA AACGCTGGTC GCGCATTTAG CTTTACTGGG CGCGCCGCTG
GAGTTACTCA CCCTGGTCGG CGATTGCGAT ACCACTGAAG CGGCAATGGA GCACATTGAA
GCATATGGCT TCGGGCATAT CTATAACCAT CTTGCCAGGC GTATTTGTTT GCGAGTCATG
CAGATGCTGC GTTTTACCAA AACGCCGCCT GTCTGCGACG CCATCCTGTT TTCTTTTGAT
AACCATATTC TCGGCAGTAA TCGTCCCGTC GACGAGATTG CTAAGGAGCT ACAATGCTAA
|
|---|
| Protein sequence | MSELSFDAPV WHHGKALRKG YTTGSCATAA AKVAALMVLR QHLIHQVSIV TPSGVTLCLN
VESPHIEGQQ AIAAIRKDGG DDVDATHGML IFARVTLNDS GEITLTGGEG IGTVTRKGIG
LPLGSAAINR TPRHTIESAV REAIGPARGA DVEIFAPEGE VRAQKTYNSR LGILGGISII
GTTGIVTPMS EESWKRSLSL ELEIKRASGL TRVILVPGNH GERFVREQMG VDTQAVVTMS
NFVGYMIEEA VRLGFCQIVL VGHPGKLIKI AAGIFHTHSH IADARMETLV AHLALLGAPL
ELLTLVGDCD TTEAAMEHIE AYGFGHIYNH LARRICLRVM QMLRFTKTPP VCDAILFSFD
NHILGSNRPV DEIAKELQC
|
|---|
| |