Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A2351 |
Symbol | cobT |
ID | 6874089 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | - |
Start bp | 2227726 |
End bp | 2228796 |
Gene Length | 1071 bp |
Protein Length | 356 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 642785443 |
Product | nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase |
Protein accession | YP_002216101 |
Protein GI | 198245450 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG2038] NaMN:DMB phosphoribosyltransferase |
TIGRFAM ID | [TIGR03160] nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0102131 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 0.00478183 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCAGACAC TACACGCTTT ACTCCGTGAC ATTCCTGCGC CGGACGCCGA GGCGATGGCG CGTGCGCAGC AACATATTGA CGGCCTGCTC AAACCGCCGG GCAGCCTGGG CAGACTGGAA ACCTTAGCCG TTCAGCTCGC GGGTATGCCG GGTCTTAACG GTACGCCGCA GGTAGGTGAA AAGGCGGTGC TGGTGATGTG CGCCGACCAT GGCGTCTGGG ATGAAGGCGT AGCGGTTTCG CCCAAAATCG TGACGGCGAT TCAGGCGGCG AATATGACGC GGGGAACAAC CGGCGTATGC GTGCTTGCCG CTCAGGCCGG TGCGAAGGTG CATGTCATTG ATGTCGGTAT TGATGCCGAA CCTATTCCTG GCGTAGTTAA TATGCGCGTC GCGCGCGGCT GCGGAAATAT TGCCGTTGGC CCGGCGATGA GTCGCTTGCA GGCTGAGGCG CTTTTGCTGG AGGTTTCCCG CTACACCTGC GACCTGGCGC AACGCGGCGT GACCTTATTT GGCGTAGGGG AGCTGGGAAT GGCGAACACT ACGCCAGCCG CCGCGATGGT CAGCGTTTTT ACAGGAAGTG ATGCAAAAGA GGTGGTGGGG ATTGGCGCGA ATCTTCCGCC TTCCCGCATC GATAATAAAG TGGACGTCGT GCGGCGGGCG ATTGCGATTA ATCAGCCCAA TCCGCGCGAC GGCATTGATG TGTTGTCGAA GGTGGGTGGT TTTGATCTGG TCGGGATGAC CGGCGTGATG CTTGGCGCGG CAAGGTGTGG CTTACCCGTA TTGCTGGATG GCTTTCTTTC CTACTCGGCA GCGCTGGCGG CCTGTCAGAT TGCGCCTGCG GTGAGACCTT ATCTGATCCC GTCGCACTTT TCGGCGGAAA AGGGCGCCCG CATCGCGCTC GCGCATTTGT CTATGGAACC CTATTTGCAT ATGGCGATGC GGTTAGGTGA AGGAAGCGGC GCGGCGCTGG CGATGCCGAT CGTGGAAGCC GCGTGCGCCA TGTTCCACAA CATGGGGGAG TTGGCGGCCA GTAATATTGT CCTGCCGGAG GGGAACGCAA ACGCAACATA A
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Protein sequence | MQTLHALLRD IPAPDAEAMA RAQQHIDGLL KPPGSLGRLE TLAVQLAGMP GLNGTPQVGE KAVLVMCADH GVWDEGVAVS PKIVTAIQAA NMTRGTTGVC VLAAQAGAKV HVIDVGIDAE PIPGVVNMRV ARGCGNIAVG PAMSRLQAEA LLLEVSRYTC DLAQRGVTLF GVGELGMANT TPAAAMVSVF TGSDAKEVVG IGANLPPSRI DNKVDVVRRA IAINQPNPRD GIDVLSKVGG FDLVGMTGVM LGAARCGLPV LLDGFLSYSA ALAACQIAPA VRPYLIPSHF SAEKGARIAL AHLSMEPYLH MAMRLGEGSG AALAMPIVEA ACAMFHNMGE LAASNIVLPE GNANAT
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