Gene SeD_A2329 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A2329 
Symbol 
ID6871243 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand+ 
Start bp2209384 
End bp2209788 
Gene Length405 bp 
Protein Length134 aa 
Translation table11 
GC content50% 
IMG OID642785424 
ProductH-NS histone family protein 
Protein accessionYP_002216084 
Protein GI198242927 
COG category[R] General function prediction only 
COG ID[COG2916] DNA-binding protein H-NS 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones7 
Plasmid unclonability p-value0.1305 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.00000000912792 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGTGAAG CTCTCAAGGC ACTGAACAAT ATTCGTACAC TTCGCGCACA TGCTCGTGAA 
ACAGATCTGG CAACTCTGGA AGAGATGCTG GAAAAACTCT CCGCTGTCGT TGAAGATCGT 
CGTGAGGAAG AAAGTGCCGT CCGTAAGGAA CAAGAAGAAC GTCAGGCTAA GCTGGAAGCT 
TTCCGTCAGA AACTGTTAGA AGATGGTATT GACCCGGCAG AACTCCTTGC TGCTGTTGGC 
TCATCCCAAC CTAAAACCAA ATCGACCCGC GCTCCACGCC CTGCCAAATA CAAATATACA 
GATGAAAACG GCAACGAGCA GACTTGGACA GGTCAGGGTC GCACTCCTAA AGCGATCGCT 
GCTGCTATCG AAGCAGGTAA AAAACTGGAA GACTTCGCAC TCTGA
 
Protein sequence
MSEALKALNN IRTLRAHARE TDLATLEEML EKLSAVVEDR REEESAVRKE QEERQAKLEA 
FRQKLLEDGI DPAELLAAVG SSQPKTKSTR APRPAKYKYT DENGNEQTWT GQGRTPKAIA 
AAIEAGKKLE DFAL