Gene SeD_A2299 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A2299 
Symbol 
ID6875475 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand+ 
Start bp2185108 
End bp2185677 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content52% 
IMG OID642785396 
Productendodeoxyribonuclease 
Protein accessionYP_002216058 
Protein GI198245664 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones6 
Plasmid unclonability p-value0.0895049 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value6.23741e-18 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAACAACT TAATGGTCGA CCTTGAGACT ATGGGCAAAA AGCCTAACGC GCCGATCGTA 
TCAATTGGGG GAGTATTCTT CGATCCTAAA AAAGGAGATC TGGGGCCGGA GTTCCATAAG 
ACGATTAACC TTGAAAGCGC AATGGAACAG GGTGCCGTTC CTGATGGCGA TACCATTCTG 
TGGTGGCTGA GGCAAAGTCC GGAGGCACGA GCGGCTATTT GCGCTGATGC AGCATCTGTC 
ACGACCGCGC TTATTGAGTT CAATGACTTT ATTACCTGTC ACGCCGACGA TTTGAAATAC 
CTGAAGGTAT GGGGTAACGG TGCCAATTTC GATAACGTTA TCCTGCGTGG CGCTTTCGAA 
CGTTCCAGCC TCCCCTGCCT GTGGAATTAC TGGAACGATC ACGACGTCCG CACGATGGTT 
ACTTTGGGTC GCGCTGTCGG CTTCGATCCC AAACGTGACA TGCCGTTCGA AGGCGATATG 
CACAACGCGC TGGCTGATGC CAGGCATCAG GCGAAATACG TTTCAGCTAT CTGGCAGAAA 
CTGATCCCGC CCACCAGCAA CAATATCTGA
 
Protein sequence
MNNLMVDLET MGKKPNAPIV SIGGVFFDPK KGDLGPEFHK TINLESAMEQ GAVPDGDTIL 
WWLRQSPEAR AAICADAASV TTALIEFNDF ITCHADDLKY LKVWGNGANF DNVILRGAFE 
RSSLPCLWNY WNDHDVRTMV TLGRAVGFDP KRDMPFEGDM HNALADARHQ AKYVSAIWQK 
LIPPTSNNI