Gene SeD_A2295 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A2295 
Symbol 
ID6874330 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand+ 
Start bp2182538 
End bp2183077 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content48% 
IMG OID642785392 
Producthypothetical protein 
Protein accessionYP_002216054 
Protein GI198244337 
COG category[R] General function prediction only 
COG ID[COG1896] Predicted hydrolases of HD superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones8 
Plasmid unclonability p-value0.222415 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones7 
Fosmid unclonability p-value1.38314e-20 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGTTTTA TTCAAACACT TTCAGGTAAA CAATTTGATT ATCTCAGCGC AACTATTGAC 
GACATTGATA TTGAAGATAT CGCCGTGGCG CTTTCCAATA TTTGCCGCTT CTCCGGACAT 
CTCCCTGAAT TTTATAGCGT GGCGCAGCAT TCCGTACTGT GCAGCCAGCT TGTATCACCG 
GAGTTTGCCT TTGAAGCCCT GATGCACGAC GCAGCCGAAG CGTATTGCCA GGATATCCCT 
GCCCCATTAA AAGCGTTACT GCCTGATTAT CGCGAGATTG AGAAACGTAC CGATCAACTG 
ATCCGCTTTA AGTTTGGCTT GCCACTGGAA GAAGCCAGCG TAGTGAAGTA TGCAGATCTT 
ACCATGCTGG CAACTGAACG CCGCGATCTG GATATTGATG ACAGTATTCC CTGGGTAATA 
CTGGAAGGTA TCCCCCCGAC AGATTTATTC GAAATCTACC CCCTTCGCCC CGGTCAGGCT 
TTCGGCCTGT TTATGGCCCG CTTTAATGAA CTGATGGAGC TACGGCAATG TGCTGCATGA
 
Protein sequence
MSFIQTLSGK QFDYLSATID DIDIEDIAVA LSNICRFSGH LPEFYSVAQH SVLCSQLVSP 
EFAFEALMHD AAEAYCQDIP APLKALLPDY REIEKRTDQL IRFKFGLPLE EASVVKYADL 
TMLATERRDL DIDDSIPWVI LEGIPPTDLF EIYPLRPGQA FGLFMARFNE LMELRQCAA