Gene SeD_A2248 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A2248 
Symbol 
ID6871727 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand- 
Start bp2148820 
End bp2149389 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content45% 
IMG OID642785349 
Producttail fibre assembly protein 
Protein accessionYP_002216011 
Protein GI198243011 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones5 
Plasmid unclonability p-value0.0284731 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value0.0191613 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAT ATCAGAATAT CAAAAATTTC AGACTTATTG ACGCGCCCGT AAACAGGGAT 
AAAACTCAGG CTGAAATAAA TATAGGTGCA TATTTTCTGG AGTCGGACGA TGGACAGGAC 
TGGTATGAGT GTCAGTCATT ATTTTCTGAT GATACTGCAA AAATAATGTA CGACCATGAG 
GGGGTTATCT GGGGTGTTGT TAATAAGCCA GTCCCGCAAC GAGGAAACAC ATATTCTGTA 
TCAATGTTGT GGCCGGTTAA TATGTCTGTT GCGGAAATAG ACGCTGCTGA CTGCCCTGAT 
GATTGCCGTG GTGATGGTAC GTGGTTATAT CAGGACGGTA AAGTCGTTCA ACGGGGTTAT 
TCTCCGGAAG AGCTGCGTAA AAAGGCGGAG GCTGAAAAAG TTCGCCGCCT TGCTGAGGCT 
GAATCAGCCA TCGCACCACT GGCACGGGCA GTAAAACTAA AAATTGCCAC AGATGAAGAG 
ATTAAACGGC TGGAAGCATG GGAACTTTAT AGCGTAATGG TAAACAGGGT GGATACATCT 
GCGCCTGACT GGCCGGATAT ACCACGCTAA
 
Protein sequence
MKKYQNIKNF RLIDAPVNRD KTQAEINIGA YFLESDDGQD WYECQSLFSD DTAKIMYDHE 
GVIWGVVNKP VPQRGNTYSV SMLWPVNMSV AEIDAADCPD DCRGDGTWLY QDGKVVQRGY 
SPEELRKKAE AEKVRRLAEA ESAIAPLARA VKLKIATDEE IKRLEAWELY SVMVNRVDTS 
APDWPDIPR