Gene SeD_A2219 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A2219 
Symbol 
ID6871447 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand+ 
Start bp2124538 
End bp2125752 
Gene Length1215 bp 
Protein Length404 aa 
Translation table11 
GC content55% 
IMG OID642785321 
Productdrug efflux system protein MdtG 
Protein accessionYP_002215984 
Protein GI198246143 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones65 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCACCCT CTGATGTCCC CATAAACTGG AAACGCAATC TAACCGTTAC CTGGCTGGGC 
TGTTTTTTAA CCGGCGCAGC ATTCAGTCTG GTCATGCCTT TTCTCCCTCT CTACGTTGAG 
CAACTCGGCG TAACAGGCCA TAGCGCGCTC AACATGTGGT CCGGGCTGGT CTTTAGTATT 
ACGTTCCTCT TTTCAGCTAT CGCTTCCCCT TTTTGGGGCG GTCTGGCGGA TCGTAAAGGG 
CGTAAGATCA TGCTGTTGCG TTCCGCTCTC GGCATGGCCA TTGTGATGCT GTTAATGGGC 
ATGGCGCAAA ATATCTGGCA ATTTCTGATC CTCCGCGCGT TATTAGGCCT GCTGGGCGGA 
TTTATTCCCA ACGCCAATGC GCTCATCGCC ACTCAGGTGC CGCGCCACAA AAGCGGCTGG 
GCGTTAGGGA CGCTCTCTAC TGGCGGCGTC AGCGGCGCTC TGCTTGGCCC ACTTGCGGGC 
GGTCTGCTCG CCGACCATTA CGGCCTTCGT CCGGTCTTTT TTATTACCGC CAGCGTTTTG 
TTTATCTGTT TTCTGCTCAC CTTCTTTTTC ATTCACGAGA ATTTCCTGCC GGTGAGCAAA 
AAAGAGATGC TTCACGTTCG GGAAGTGGTC GCCTCGTTAA AAAATCCCCG CCTGGTGTTA 
AGCCTGTTTG TCACCACGCT GATTATTCAG GTGGCGACGG GGTCTATTGC GCCCATCCTG 
ACGCTCTATG TGCGCGAACT CGCGGGAGAT GTCAGTAATA TTGCGTTCAT TAGCGGGATG 
ATAGCGTCCG TTCCCGGCGT GGCGGCATTA CTTAGCGCCC CCCGGCTCGG CAAGCTTGGC 
GACAGAATTG GCCCGGAAAA GATCCTTATC GTCGCGCTGA TTATTTCCGT ACTGCTGCTG 
ATTCCAATGT CTTTTGTGCA AACGCCGTGG CAGCTCGCGC TATTGCGGTT TCTGCTTGGC 
GCGGCGGATG GCGCGCTGCT GCCAGCCGTT CAAACTCTGC TGGTTTACAA CTCTACCAAC 
CAGATAGCCG GGCGCATATT CAGTTACAAC CAATCTTTCC GCGATATCGG CAACGTCACC 
GGCCCTCTCA TGGGTGCCGC AATTTCCGCG AGCTATGGCT TCCGCGCCGT ATTCTGCGTC 
ACGGCAGGCG TGGTGTTGTT CAATGCTATC TATTCATGGA ACAGCTTACG ACGGCGCAGA 
CTGGCAATAG AATAA
 
Protein sequence
MSPSDVPINW KRNLTVTWLG CFLTGAAFSL VMPFLPLYVE QLGVTGHSAL NMWSGLVFSI 
TFLFSAIASP FWGGLADRKG RKIMLLRSAL GMAIVMLLMG MAQNIWQFLI LRALLGLLGG 
FIPNANALIA TQVPRHKSGW ALGTLSTGGV SGALLGPLAG GLLADHYGLR PVFFITASVL 
FICFLLTFFF IHENFLPVSK KEMLHVREVV ASLKNPRLVL SLFVTTLIIQ VATGSIAPIL 
TLYVRELAGD VSNIAFISGM IASVPGVAAL LSAPRLGKLG DRIGPEKILI VALIISVLLL 
IPMSFVQTPW QLALLRFLLG AADGALLPAV QTLLVYNSTN QIAGRIFSYN QSFRDIGNVT 
GPLMGAAISA SYGFRAVFCV TAGVVLFNAI YSWNSLRRRR LAIE