Gene SeD_A2218 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A2218 
Symbol 
ID6872700 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp2123463 
End bp2124383 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content54% 
IMG OID642785320 
Productlipid A biosynthesis lauroyl acyltransferase 
Protein accessionYP_002215983 
Protein GI198242211 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1560] Lauroyl/myristoyl acyltransferase 
TIGRFAM ID[TIGR02207] lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones65 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGAAGT TGCCTAAATT CTCCGTGGCC TTACTGCACC CGCGCTATTG GTTAACCTGG 
TTGGGTATAG GCGCGCTTTG GTTGGTCGTG CAACTCCCCT ACCCGGTCAT CTATAAATTG
GGTTGCGCAT TGGGCCACCT GGCGCGACGC GTAATGAAAC GCCGCGCAAA AATCGCCTAT
CGCAACCTTG AATTATGCTT TCCGGAAATG ACCGCGCAGG AACGCCACAC TATGGTGGTC
AAAAACTTTG AATCCGTCGG TATGGGCGTG ATGGAAACCG GCATGGCCTG GTTCTGGCCC
GATCGGCGAG TGAACCGCTG GATGGAAGCG AGCGGTCTGG AGCATATCCG TGAAGTTAAG
GCGCAGGGGC TGGGGTTCAT TCTGGTAGGA ATACATTTTC TTACCCTTGA GTTTGGCGCC
CGCATGTTTG GTATGCATAA CCCGGGGATC GGAGTTTATC GCCCGAATGA TAATCCGTTG
CTCGACTGGT TACAGACCTG GGGACGCTTA CGCTCCAATA AATCGATGTT GGATCGCAAA
GATCTGAAAG GCATGGTTAA GGCATTGAAA AGCGGCGAAT TGATCTGGTA TGCGCCGGAT
CACGATTACG GCCCGCGCGC CAGCGTCTTT GTACCGTTAT TCGCCGTCGA CCAGGCCGCT
ACGACCTCCG GTACCTGGAT GCTCGCGCGC ATGTCTAAAG CCTGTATTAT CCCCTTCGTG
CCTCGCCGTA AACCCGATGG GAAAGGCTAC GAACTGATCA TTCTTCCTGC GGAATATTCG
CCTCCGCTGG AGAGCGCAGA AGCGACTGCC GCATGGATGA ATAAGATTGT TGAGCAGTGC
ATTATGATGG CGCCAGAGCA GTATATGTGG CTGCATCGCC GCTTTAAAAC TCGCCCTGAA
GGCGTACCGT CGCGCTATTG A
 
Protein sequence
MTKLPKFSVA LLHPRYWLTW LGIGALWLVV QLPYPVIYKL GCALGHLARR VMKRRAKIAY 
RNLELCFPEM TAQERHTMVV KNFESVGMGV METGMAWFWP DRRVNRWMEA SGLEHIREVK
AQGLGFILVG IHFLTLEFGA RMFGMHNPGI GVYRPNDNPL LDWLQTWGRL RSNKSMLDRK
DLKGMVKALK SGELIWYAPD HDYGPRASVF VPLFAVDQAA TTSGTWMLAR MSKACIIPFV
PRRKPDGKGY ELIILPAEYS PPLESAEATA AWMNKIVEQC IMMAPEQYMW LHRRFKTRPE
GVPSRY