Gene SeD_A2216 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A2216 
Symbol 
ID6875388 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand+ 
Start bp2121564 
End bp2122139 
Gene Length576 bp 
Protein Length191 aa 
Translation table11 
GC content50% 
IMG OID642785318 
Producthypothetical protein 
Protein accessionYP_002215981 
Protein GI198243744 
COG category[S] Function unknown 
COG ID[COG2353] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.933696 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones61 
Fosmid unclonability p-value0.515995 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAA ACCTGCTGGG ATTCACCCTC GCATCCTTGT TATTCACGAC CGGTTCCGCC 
GTGGCGGCGG AGTATAAAAT TGATAAAGAA GGCCAACATG CGTTCGTCAA TTTCCGCATT 
CAGCATCTAG GCTACAGCTG GCTATACGGC ACCTTTAAAG ATTTCGACGG CACGTTCACT 
TTTGACGAAA AAAATCCGTC GGCAGACAAA GTGAACGTGA CCATTAACAC CAATAGCGTC 
GACACTAACC ATGCCGAACG TGACAAACAC CTGCGTAGCG CGGAGTTTCT TAATGTTGCG 
AAATTCCCGC AGGCAACCTT CACCTCTACC AGCGTGAAAA AAGAGGGCGA TGAACTGGAT 
ATTACCGGCA ATCTGACGCT CAATGGCGTG ACTAAACCGG TGACGCTGGA AGCGAAGCTG 
ATGGGCCAGG GCGATGATCC GTGGGGCGGT AAGCGCGCGG GCTTTGAGGC CGAAGGAAAA 
ATTAAGCTGA AGGATTTCAA TATAACTACC GATCTCGGCC CGGCCTCACA AGAGGTTGAG 
CTTATCATCT CAGTAGAAGG CGTTCAGCAG AAGTAA
 
Protein sequence
MKKNLLGFTL ASLLFTTGSA VAAEYKIDKE GQHAFVNFRI QHLGYSWLYG TFKDFDGTFT 
FDEKNPSADK VNVTINTNSV DTNHAERDKH LRSAEFLNVA KFPQATFTST SVKKEGDELD 
ITGNLTLNGV TKPVTLEAKL MGQGDDPWGG KRAGFEAEGK IKLKDFNITT DLGPASQEVE 
LIISVEGVQQ K