Gene SeD_A2199 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A2199 
SymbolflgA 
ID6871313 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp2108908 
End bp2109567 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content58% 
IMG OID642785301 
Productflagellar basal body P-ring biosynthesis protein FlgA 
Protein accessionYP_002215964 
Protein GI198242724 
COG category[N] Cell motility
[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1261] Flagellar basal body P-ring biosynthesis protein 
TIGRFAM ID[TIGR03170] flagella basal body P-ring formation protein FlgA 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value0.00112928 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCAAACGT TAAAACGAGG ATTCGCCGTG GCGGCTTTGC TGTTCAGCCC CCTGACAATG 
GCGCAGGACA TCAACGCCCA GCTGACCACG TGGTTTTCCC AGCGTCTGGC TGGCTTCAGC
GACGAGGTGG TTGTCACGCT CCGTTCATCG CCCAATCTGC TACCGAGCTG CGAACAGCCA
GCCTTCAGCA TGACGGGCAG CGCGAAGCTG TGGGGCAACG TCAATGTGGT GGCGCGCTGC
GCCAATGAAA AACGTTATTT ACAGGTGAAT GTGCAAGCGA CCGGCAATTA TGTCGCCGTT
GCCGCGCCCG TCGCGCGCGG CGGAAAATTG ACGCCGGCCA ACGTCACGCT AAAACGTGGC
AGGCTGGATC AGTTACCGCC GCGGACGGTA CTGGATATCC GTCAGATTCA GGATGCCGTC
AGTTTGCGCG ATCTCGCACC CGGGCAGCCG GTACAGCTTA CGATGATACG TCAGGCCTGG
CGCGTCAAAG CGGGGCAACG AGTACAGGTC ATCGCCAATG GCGAGGGGTT CAGCGTCAAT
GCGGAAGGTC AGGCGATGAA TAATGCCGCC GTCGCGCAAA ATGCGCGCGT GCGCATGACA
TCGGGTCAAA TCGTGAGTGG AACCGTCGAT TCTGATGGGA ATATTCTTAT TAACCTATAA
 
Protein sequence
MQTLKRGFAV AALLFSPLTM AQDINAQLTT WFSQRLAGFS DEVVVTLRSS PNLLPSCEQP 
AFSMTGSAKL WGNVNVVARC ANEKRYLQVN VQATGNYVAV AAPVARGGKL TPANVTLKRG
RLDQLPPRTV LDIRQIQDAV SLRDLAPGQP VQLTMIRQAW RVKAGQRVQV IANGEGFSVN
AEGQAMNNAA VAQNARVRMT SGQIVSGTVD SDGNILINL