| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A2194 |
|---|
| Symbol | flgF |
|---|
| ID | 6873712 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011205 |
|---|
| Strand | - |
|---|
| Start bp | 2105203 |
|---|
| End bp | 2105958 |
|---|
| Gene Length | 756 bp |
|---|
| Protein Length | 251 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 642785296 |
|---|
| Product | flagellar basal body rod protein FlgF |
|---|
| Protein accession | YP_002215959 |
|---|
| Protein GI | 198245943 |
|---|
| COG category | [N] Cell motility |
|---|
| COG ID | [COG4787] Flagellar basal body rod protein |
|---|
| TIGRFAM ID | [TIGR02490] flagellar basal-body rod protein FlgF
[TIGR03506] fagellar hook-basal body proteins |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 0.000311008 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGATCACG CAATTTATAC CGCCATGGGG GCGGCCAGCC AGACGCTTAA CCAGCAGGCG
GTAACGGCCA GCAACCTGGC TAATGCCTCA ACGCCGGGCT TTCGCGCGCA GCTTAACGCG
CTACGCGCGG TGCCCGTTGA TGGCCTCTCT TTAGCAACGC GCACGCTGGT TACGGCGTCG
ACGCCCGGGG CGGATATGAC CCCGGGTCAG TTGGACTACA CTTCCCGCCC GCTGGATGTC
GCGTTACAGC AGGACGGCTG GCTGGTAGTG CAAGCGGCGG ATGGCGCTGA AGGATATACC
CGTAACGGGA ATATCCAGGT GGGTCCGACC GGGCAGTTAA CCATTCAGGG ACATCCGGTT
ATCGGCGAAG GCGGCCCGAT TACCGTTCCT GAAGGGTCGG AAATCACCAT TGCGGCAGAC
GGCACGATCT CCGCGCTCAA TCCCGGCGAC CCGCCAAACA CGGTGGCGCC CGTTGGGCGA
CTGAAGCTGG TCAAAGCGGA AGGCAATGAA GTGCAGCGGA GCGATGACGG TTTATTCCGC
CTTACCGCCG AGGCACAGGC TGAACGCGGG GCGGTACTGG CCGCCGACCC GTCAATTCGC
ATTATGTCGG GCGTGCTGGA GGGCAGTAAC GTCAAGCCGG TTGAAGCGAT GACCGACATG
ATCGCCAACG CACGTCGTTT TGAAATGCAG ATGAAGGTTA TCACCAGCGT AGATGAGAAC
GAAGGGCGAG CTAACCAACT GCTGTCGATG AGTTAA
|
|---|
| Protein sequence | MDHAIYTAMG AASQTLNQQA VTASNLANAS TPGFRAQLNA LRAVPVDGLS LATRTLVTAS
TPGADMTPGQ LDYTSRPLDV ALQQDGWLVV QAADGAEGYT RNGNIQVGPT GQLTIQGHPV
IGEGGPITVP EGSEITIAAD GTISALNPGD PPNTVAPVGR LKLVKAEGNE VQRSDDGLFR
LTAEAQAERG AVLAADPSIR IMSGVLEGSN VKPVEAMTDM IANARRFEMQ MKVITSVDEN
EGRANQLLSM S
|
|---|
| |