Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A2189 |
Symbol | flgK |
ID | 6871661 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | - |
Start bp | 2099869 |
End bp | 2101530 |
Gene Length | 1662 bp |
Protein Length | 553 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 642785291 |
Product | flagellar hook-associated protein FlgK |
Protein accession | YP_002215954 |
Protein GI | 198241785 |
COG category | [N] Cell motility |
COG ID | [COG1256] Flagellar hook-associated protein |
TIGRFAM ID | [TIGR02492] flagellar hook-associated protein FlgK |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 0.0000358653 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTCCAGCT TGATTAATCA CGCCATGAGC GGACTTAACG CCGCGCAGGC CGCGTTAAAT ACGGTCAGTA ATAACATCAA CAATTATAAC GTTGCGGGTT ATACCCGGCA GACAACTATT CTGGCGCAGG CAAACAGTAC GTTAGGGGCT GGCGGCTGGA TAGGTAATGG CGTTTACGTT TCAGGCGTAC AGCGCGAATA TGATGCGTTT ATCACTAATC AGCTACGCGG CGCGCAAAAC CAGAGCAGCG GCTTAACCAC GCGCTATGAA CAAATGTCGA AAATCGACAA CCTGCTGGCC GATAAATCCA GCTCACTGTC TGGCTCGCTG CAGAGTTTTT TTACCAGCCT GCAAACGTTA GTCAGTAACG CGGAAGATCC TGCGGCGCGT CAGGCGCTGA TTGGTAAAGC GGAAGGGCTG GTAAACCAGT TCAAAACCAC CGATCAGTAT CTGCGCGATC AGGATAAACA GGTCAATATC GCGATTGGCT CCAGCGTGGC GCAAATCAAC AATTACGCGA AGCAGATAGC TAACCTGAAC GATCAAATCT CCCGTATGAC GGGCGTAGGC GCGGGCGCAT CGCCGAACGA CCTGCTCGAT CAGCGTGATC AGTTGGTCAG CGAGCTTAAC AAGATCGTTG GCGTCGAGGT GAGTGTACAG GACGGCGGCA CCTATAACCT GACGATGGCC AATGGCTATA CGCTGGTGCA GGGGTCGACG GCGCGTCAGT TGGCGGCGGT TCCCTCCAGC GCCGACCCGA CGCGAACGAC TGTCGCTTAT GTCGATGAGG CCGCCGGTAA CATCGAAATT CCGGAAAAGT TGCTGAACAC CGGTTCGCTC GGCGGGCTAC TGACGTTCCG TTCTCAGGAT CTGGATCAGA CTCGTAATAC GCTGGGCCAG TTGGCGTTGG CGTTTGCCGA TGCGTTTAAC GCGCAGCATA CCAAAGGTTA TGACGCCGAC GGCAATAAAG GGAAAGACTT CTTTAGCATT GGCTCGCCGG TGGTATATAG CAACAGTAAT AATGCCGATA AAACGGTATC GCTAACCGCT AAGGTGGTCG ACAGCACGAA GGTTCAGGCG ACGGATTATA AGATTGTTTT TGACGGTACA GACTGGCAGG TTACTCGCAC TGCGGATAAC ACCACCTTCA CGGCGACAAA AGATGCTGAC GGAAAACTGG AGATTGACGG TCTGAAAGTG ACGGTAGGGA CCGGCGCACA GAAAAACGAC AGTTTTCTTC TCAAGCCGGT CAGCAATGCT ATCGTCGACA TGAACGTTAA AGTGACGAAT GAAGCCGAGA TTGCGATGGC GTCTGAGTCA AAACTCGATC CTGACGTGGA TACCGGCGAC AGCGATAACC GCAATGGTCA GGCATTGCTG GACTTACAAA ACAGCAATGT AGTGGGCGGC AACAAAACTT TTAACGATGC TTACGCCACG TTGGTCAGCG ATGTGGGTAA CAAAACGTCA ACGCTGAAAA CCAGCAGCAC CACGCAGGCG AATGTGGTTA AACAGCTTTA TAAACAGCAA CAGTCGGTTT CCGGCGTTAA CCTCGACGAA GAGTACGGCA ATTTGCAGCG TTATCAGCAG TATTATCTGG CGAATGCGCA AGTATTGCAG ACCGCGAATG CGCTGTTTGA TGCGTTATTG AATATTCGCT AA
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Protein sequence | MSSLINHAMS GLNAAQAALN TVSNNINNYN VAGYTRQTTI LAQANSTLGA GGWIGNGVYV SGVQREYDAF ITNQLRGAQN QSSGLTTRYE QMSKIDNLLA DKSSSLSGSL QSFFTSLQTL VSNAEDPAAR QALIGKAEGL VNQFKTTDQY LRDQDKQVNI AIGSSVAQIN NYAKQIANLN DQISRMTGVG AGASPNDLLD QRDQLVSELN KIVGVEVSVQ DGGTYNLTMA NGYTLVQGST ARQLAAVPSS ADPTRTTVAY VDEAAGNIEI PEKLLNTGSL GGLLTFRSQD LDQTRNTLGQ LALAFADAFN AQHTKGYDAD GNKGKDFFSI GSPVVYSNSN NADKTVSLTA KVVDSTKVQA TDYKIVFDGT DWQVTRTADN TTFTATKDAD GKLEIDGLKV TVGTGAQKND SFLLKPVSNA IVDMNVKVTN EAEIAMASES KLDPDVDTGD SDNRNGQALL DLQNSNVVGG NKTFNDAYAT LVSDVGNKTS TLKTSSTTQA NVVKQLYKQQ QSVSGVNLDE EYGNLQRYQQ YYLANAQVLQ TANALFDALL NIR
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