| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A2171 |
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| Symbol | |
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| ID | 6871320 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011205 |
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| Strand | - |
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| Start bp | 2084391 |
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| End bp | 2085200 |
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| Gene Length | 810 bp |
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| Protein Length | 269 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 642785277 |
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| Product | 4-amino-4-deoxychorismate lyase |
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| Protein accession | YP_002215940 |
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| Protein GI | 198246126 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase |
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| TIGRFAM ID | [TIGR03461] aminodeoxychorismate lyase |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.216662 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.000000000000025967 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGTTTTTAA TTAATGGCCA TGCGCAGGAT CAACTTGCTG TAAGCGACCG GGCGACGCAG
TTCGGCGATG GCAGTTTTAC GACCGCACGT ATTGTTGATG GCAACATTTG CCATCTGGAA
GCGCATCTTC AGCGCTTGCA GGTTGCCTGT GAAAAATTAC GGATCGCTTT TAGCCATTGG
GCGACCCTTC GGCAAGAGAT GACAATGTTG GCCACAGGGC ATGATTCAGG CGTGTTGAAA
GTGATCATTA GCCGTGGTAG CGGTGGCCGG GGATACAGCG CCATGAATTG TCAGGCAGCT
ACCCGAATCC TCTCCGTTTC TGCTTATCCC GCTTATTATT CTCAGTGGCG TAAGCAAGGC
ATCACTCTTA CCCTTAGTCC CATACCGCTT GGGCGCAATC CTTATCTTGC CGGATTAAAA
CATCTGAACC GCCTCGAACA GGTGTTGATT CGCTCTCATC TTGAGCAGAC GGACGCCGAT
GAGGCGCTGG TTCTTGACAG CGAGGGATGG GTTACGGAAT GCTGTGCGGC TAATTTGTTC
TGGCGTACAG GCGACATTGT TTTTACGCCG CGTCTGGATC AGGCCGGGGT GAACGGCATT
ATGCGACAAT TTTGTTTACG CCAACTGGCG CAATCTCCTT TCCAGGTTCT TGAAGTACAG
GCGAGAGAGG AGGCAGTCAG GCAGGCGGAT GAGATTATCA TTTGCAACGC GCTAATGCCG
ATTATTCCCA TACGCGCCTA TCACGGGACG TCGTATTCTT CGCGAACACT GTTTCAATTT
TTAGCCCCAT TTTGTGAGCA TCCGAATTAG
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| Protein sequence | MFLINGHAQD QLAVSDRATQ FGDGSFTTAR IVDGNICHLE AHLQRLQVAC EKLRIAFSHW
ATLRQEMTML ATGHDSGVLK VIISRGSGGR GYSAMNCQAA TRILSVSAYP AYYSQWRKQG
ITLTLSPIPL GRNPYLAGLK HLNRLEQVLI RSHLEQTDAD EALVLDSEGW VTECCAANLF
WRTGDIVFTP RLDQAGVNGI MRQFCLRQLA QSPFQVLEVQ AREEAVRQAD EIIICNALMP
IIPIRAYHGT SYSSRTLFQF LAPFCEHPN
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