Gene SeD_A2168 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A2168 
Symbol 
ID6873377 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp2081734 
End bp2082738 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content59% 
IMG OID642785274 
ProductDNA polymerase III subunit delta' 
Protein accessionYP_002215937 
Protein GI198245939 
COG category[L] Replication, recombination and repair 
COG ID[COG2812] DNA polymerase III, gamma/tau subunits 
TIGRFAM ID[TIGR00678] DNA polymerase III, delta' subunit 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.0000000000087583 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAATGGT ATCCATGGTT ACGGCCCGCC TATGAAAAAC TGGTAGAAAG TTACCAGGCG 
GGACGTGGGC ACCATGCGCT ACTGATTCAG GCCTTACCTG GCATGGGCGA CGAGGCGCTG
TGCTATGCGC TGAGCCGTTA TCTGTTATGC CAGCAGCCTG AGGGCCACAA AAGCTGTGGG
CATTGCCGTG GCTGTCAGCT TATGCAGGCT GGCACGCATC CGGACTATTA CACGCTGACG
CCGGATAAAG GCAAAAGCAG CCTCGGCGTA GATGCGGTAC GCGAGGTAAG CGAGAAATTG
TACGAGCACT CCCGTCTGGG CGGTGCGAAG GTGGTGTGGA TTGCGGATGC GGCGCTATTA
ACCGACGCCG CCGCCAATGC GTTGCTCAAA ACGCTGGAAG AGCCGCCGGA GCAAACCTGG
TTTTTCCTTG CCAGCCCGGA GCCTGCTCGT CTGTTGGCGA CATTACGTAG CCGCTGTCGG
CTGCATCATC TGGCGCCGCC GTCCGAATCG TATGCGATGT CATGGCTATC GCGAGAAGTG
ACGGCGTCAC AAGAAGCATT GCTCACGGCG CTACGTCTGA ATGCGGGGTC GCCCGGCGCC
GCGCTGGCGC TGTTGCAGTC TGAACGCTGG GCGCAGCGTG AGGCGCTGTG TCAGGCGTTA
ATGGACAGTT TGCATACGGG CGACTGGTAT GCGTTATTAA CGGCGCTCAA TCATGAGCAA
GCCCCGGCGC GCCTGCACTG GCTGGCGACG CTGCTGGTAG ACGCGCTGAA ACGTCAGCAC
GGCGCGTCGT ACCTGACAAA CGTTGATGCG GACGCGGTTG TTGCCGCGCT GGCGGGGCCG
CTATCCCCGG CGCGTATTCA GGCAATCCTG AACGATGTTT GCCATTGTCG TGATCAATTA
CTTCATGTGA CCGGATTAAA CCGCGAACTG GTATTAACCG ATCTCATTCT CCGCATCGAG
CATTACCTGC AACCAGGCAC CTTGTTGCCT GTTCCTCATC TTTGA
 
Protein sequence
MKWYPWLRPA YEKLVESYQA GRGHHALLIQ ALPGMGDEAL CYALSRYLLC QQPEGHKSCG 
HCRGCQLMQA GTHPDYYTLT PDKGKSSLGV DAVREVSEKL YEHSRLGGAK VVWIADAALL
TDAAANALLK TLEEPPEQTW FFLASPEPAR LLATLRSRCR LHHLAPPSES YAMSWLSREV
TASQEALLTA LRLNAGSPGA ALALLQSERW AQREALCQAL MDSLHTGDWY ALLTALNHEQ
APARLHWLAT LLVDALKRQH GASYLTNVDA DAVVAALAGP LSPARIQAIL NDVCHCRDQL
LHVTGLNREL VLTDLILRIE HYLQPGTLLP VPHL