| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A2165 |
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| Symbol | |
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| ID | 6872031 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011205 |
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| Strand | + |
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| Start bp | 2076939 |
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| End bp | 2079113 |
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| Gene Length | 2175 bp |
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| Protein Length | 724 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 642785271 |
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| Product | ferric-rhodotorulic acid outer membrane transporter |
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| Protein accession | YP_002215934 |
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| Protein GI | 198242073 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4773] Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.00000000331924 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCTTTCA TTCAATACCG CCGGGACAAA CACCTTCCGT CCACCGCCGC ACCGTCGCTG
TTAGCTATGG GTATGGCGAT GGCATTTATG CCTGCCGCCT TCGCGGCTGA GGATACCGTT
ATTGTCGAAG GCGCGACGAC CGCTGACGCC GTAAACCGTG AAGAACAGGA TTACAGCGTG
AAAACGACCG CAGCGGGCAC CAAAATGCCG ATGACTCAGC GCGATATCCC GCAGTCGGTC
AGTATTGTCA GCCAACAGCG TATGGAAGAC CAGCAGTTGC AAACCCTGGG CGAGGTGATG
ACCAATACGC TGGGGATCAG CGGAAGCCAG GCTGACTCCG ATCGCATCAG CTATTACTCG
CGCGGGTTTG AAATTGACAA CTATATGGTT GACGGTATTC CAACGTATTT TGAGTCCCGC
TGGAATCTGG GCGATGCGCT AACGGATACC GCGCTGTATG AGCGCGTGGA GGTGGTTCGC
GGCGCGAATG GGCTGATGAC CGGGACCGGT AATCCTTCGG CCTCAATTAA TATGATCCGT
AAACACGCCA CCAGTCGGGA GTTCAAAGGT AACGTTTCCA CAGAATACGG TAGCTGGAAT
AAGCAGCGTT ACGTCATGGA TCTGCAAAGT CCGCTCACCG CGGACGGCAA TGTCCGTGGG
CGCATCGTGG CGGGTTATCA GAATAATGAT TCCTGGCTGG ACCGCTATAA CAGTGAGAAA
GCGTTCTTTT CCGGAATTGT CGATGCCGAT CTGGGTACAA CCACCAACCT TTCAGCCGGT
TATGAATATC AAAAAATTGA TGTCAACAGC CCAACCTGGG GCGGTCTGCC GCGCTGGAAC
ACCGATGGCA GCAAAAATAG CTATGACCGC GCGCGTAGTA CCGCCCCGGA CTGGGCTTAT
AACAACAAAG AGATAAATAA ATTCTTCGTC ACGCTTAAAC AGCGTTTTGC CGAAAGCTGG
CAGGCGACCC TGAATGCGAC CCATACTGAG GTCAAATTCG ACAGTAAAAT GATGTATATC
GATGCGTTAG TCGATAAAGA GACAGGTACG CTGGTGAGTC CTTATGGCGC AAGCTACCCC
GTGGTCGGCG GTACGGGCTG GAACAGCGGC AAGCGCAAAG TAGATGCCAT AGATCTCTTT
GCCGATGGCG CTTATGAGCT GTTTGGCCGT CAGCACAATA TGATGTTTGG CGGCAGTTAT
AGTAAACAGA ATAACCGCTA TTTTAGCGCC TGGGCGAACG TCTTTCCGGA CGACATTGGC
AACTTCAGCG CCTTTAACGG TAATTTCCCC CAAACCCACT GGGCGCCACA AAATCTGGCG
CAGGACGATA CCACGCATAT GAAATCGCTG TATGCCGCTA CGCGCATTTC GCTGGCCGAC
CCGCTGCATC TGATTCTCGG CGCTCGTTAT ACCAACTGGC GTGCTGATAC ACTGACCTAC
AGCATGGAGA AAAACCATAC CACGCCGTAT GCCGGGCTGA TTTATGATAT CAACGACAAC
TGGTCCGCTT ATGCCAGTTA TACCTCTATC TTTCAGCCGC AGAATAAACG CGACAAAGCG
GGTCAATATC TGGCTCCGAT TACCGGTAAT AACTATGAAG CGGGTCTGAA GTCCGACTGG
ATGAACAGTC GCCTCACCAC CACGTTGTCC GTATTCCGCA TTGAGCAGAA TAACGTCGCT
CAGGCAACCA CTATTCCCAT CCCTGGCAGT AATGGGGAGT TTGCCTGGAA GTCTACTGAC
GGAACGGTGA GCAAAGGCGT CGAATTTGAA GTGAACGGCG CAATTACCGA TAACTGGCAG
ATGACTTTCG GGGCTACCCG GTATGTTGCC GAGGACAATG AAGGTAACGC CGTGAACCCT
AATCTTCCGC GCACCAGCGT GAAGTTATTC ACCCGCTATC GTCTGCCGGC GATACCGGAG
CTGACGGTCG GCGGCGGCGT GAACTGGCAG AATCGGGTTT ACAAAGATAC CACGACGCCG
TACGGCACTT TCCGCGCCGA ACAGGGCAGC TATGCGCTGG TCGATCTGTT TACCCGCTAT
CAGGTGACGA AAAATTTCTC CGTACAGGGA AACATCAACA ACCTGTTTGA TAAAACCTAC
GACACCAATA TTGATGGTTC CATTGTTTAC GGCGCACCGC GTAACGTCAG CCTCACCGCC
AATTATCAGT TCTGA
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| Protein sequence | MSFIQYRRDK HLPSTAAPSL LAMGMAMAFM PAAFAAEDTV IVEGATTADA VNREEQDYSV
KTTAAGTKMP MTQRDIPQSV SIVSQQRMED QQLQTLGEVM TNTLGISGSQ ADSDRISYYS
RGFEIDNYMV DGIPTYFESR WNLGDALTDT ALYERVEVVR GANGLMTGTG NPSASINMIR
KHATSREFKG NVSTEYGSWN KQRYVMDLQS PLTADGNVRG RIVAGYQNND SWLDRYNSEK
AFFSGIVDAD LGTTTNLSAG YEYQKIDVNS PTWGGLPRWN TDGSKNSYDR ARSTAPDWAY
NNKEINKFFV TLKQRFAESW QATLNATHTE VKFDSKMMYI DALVDKETGT LVSPYGASYP
VVGGTGWNSG KRKVDAIDLF ADGAYELFGR QHNMMFGGSY SKQNNRYFSA WANVFPDDIG
NFSAFNGNFP QTHWAPQNLA QDDTTHMKSL YAATRISLAD PLHLILGARY TNWRADTLTY
SMEKNHTTPY AGLIYDINDN WSAYASYTSI FQPQNKRDKA GQYLAPITGN NYEAGLKSDW
MNSRLTTTLS VFRIEQNNVA QATTIPIPGS NGEFAWKSTD GTVSKGVEFE VNGAITDNWQ
MTFGATRYVA EDNEGNAVNP NLPRTSVKLF TRYRLPAIPE LTVGGGVNWQ NRVYKDTTTP
YGTFRAEQGS YALVDLFTRY QVTKNFSVQG NINNLFDKTY DTNIDGSIVY GAPRNVSLTA
NYQF
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