Gene SeD_A2158 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A2158 
Symbolndh 
ID6874790 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp2071242 
End bp2072573 
Gene Length1332 bp 
Protein Length443 aa 
Translation table11 
GC content54% 
IMG OID642785264 
ProductNADH dehydrogenase 
Protein accessionYP_002215927 
Protein GI198244583 
COG category[C] Energy production and conversion 
COG ID[COG1252] NADH dehydrogenase, FAD-containing subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value0.00000756944 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
TTGGTTAATA AATTTAAGGG GGTCACGTTG ACTACACCAT TAAAAAAGAT CGTGATTGTC 
GGCGGCGGCG CTGGCGGGCT GGAAATGGCG ACGCAGTTAG GCCATAAACT GGGGCGCAAG
AAAAAAGCGA AAATCACGCT GGTAGACAGA AATCACAGCC ATCTGTGGAA ACCATTGCTG
CACGAAGTGG CGACTGGCTC TCTGGACGAA GGCGTGGATG CGCTGAGCTA TCTGGCTCAT
GCGCGTAATC ATGGTTTCCA GTTCCAGCTG GGGTCGGTGA TGGATATCGA TCGCGAAGCG
AAGACCATCA CCATTGCCGA GTTGCGTGAT GAAAAGGGCG AACTGCTGGT GCCGGAGCGC
AAAATCGCGT ATGACACGCT GGTGATGGCG CTGGGCAGCA CCTCTAATGA TTTCAACACG
CCGGGCGTGA AAGAGCACTG TATCTTCCTC GATAACCCGC ATCAGGCGCG CCGTTTTCAC
CAGGAGATGC TGAACCTGTT CCTCAAGTAT TCGGCTAATC TGGGCGCGAA CGGTAAGGTC
AATATCGCCA TCGTTGGCGG CGGTGCGACG GGGGTTGAGC TGTCGGCTGA ACTGCATAAT
GCGGTAAAAC AGCTGCATAG CTATGGTTAT AAGGGGCTGA CCAACGACGC GCTGAACGTG
ACGTTGGTTG AGGCTGGCGA GCGTATTCTG CCTGCGTTGC CGCCGCGTAT CTCCAGCGCC
GCGCATAATG AACTGACCAA ACTGGGCGTT CGCGTGCTGA CGCAAACTAT GGTCACCAGC
GCCGACGAAG GCGGTCTGCA TACGAAAGAA GGTGAATATA TTCAGGCCGA TCTGATGGTG
TGGGCGGCGG GTATCAAAGC GCCAGATTTT ATGAAAGAGA TTGGTGGTCT GGAAACGAAC
CGCATTAACC AACTGGTGGT GGAACCGACG CTGCAAACCA CGCGCGATCC TGATATTTAT
GCGATTGGCG ACTGCGCTTC CTGCGCACGT CCGGAGGGAG GTTTTGTGCC GCCTCGCGCT
CAGGCGGCGC ATCAGATGGC TACCTGCGCG ATGAATAACA TTCTGGCGCA GATGAATGGC
AAACCGCTGA AAGCTTACCA GTATAAAGAT CATGGATCGC TGGTCTCTCT GTCCAACTTC
TCTACCGTGG GTAGTCTGAT GGGGAACCTG ACCCGCGGTT CAATGATGAT TGAAGGACGT
ATCGCCCGCT TCGTGTATAT CTCGCTATAC CGTATGCACC AGATAGCGCT GCATGGATAC
TTTAAAACCG GCCTGATGAT GCTGGTGGGC AGTATTAACC GCGTCATTCG TCCGCGTCTG
AAACTGCATT AA
 
Protein sequence
MVNKFKGVTL TTPLKKIVIV GGGAGGLEMA TQLGHKLGRK KKAKITLVDR NHSHLWKPLL 
HEVATGSLDE GVDALSYLAH ARNHGFQFQL GSVMDIDREA KTITIAELRD EKGELLVPER
KIAYDTLVMA LGSTSNDFNT PGVKEHCIFL DNPHQARRFH QEMLNLFLKY SANLGANGKV
NIAIVGGGAT GVELSAELHN AVKQLHSYGY KGLTNDALNV TLVEAGERIL PALPPRISSA
AHNELTKLGV RVLTQTMVTS ADEGGLHTKE GEYIQADLMV WAAGIKAPDF MKEIGGLETN
RINQLVVEPT LQTTRDPDIY AIGDCASCAR PEGGFVPPRA QAAHQMATCA MNNILAQMNG
KPLKAYQYKD HGSLVSLSNF STVGSLMGNL TRGSMMIEGR IARFVYISLY RMHQIALHGY
FKTGLMMLVG SINRVIRPRL KLH