Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A2158 |
Symbol | ndh |
ID | 6874790 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | - |
Start bp | 2071242 |
End bp | 2072573 |
Gene Length | 1332 bp |
Protein Length | 443 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 642785264 |
Product | NADH dehydrogenase |
Protein accession | YP_002215927 |
Protein GI | 198244583 |
COG category | [C] Energy production and conversion |
COG ID | [COG1252] NADH dehydrogenase, FAD-containing subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 0.00000756944 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | TTGGTTAATA AATTTAAGGG GGTCACGTTG ACTACACCAT TAAAAAAGAT CGTGATTGTC GGCGGCGGCG CTGGCGGGCT GGAAATGGCG ACGCAGTTAG GCCATAAACT GGGGCGCAAG AAAAAAGCGA AAATCACGCT GGTAGACAGA AATCACAGCC ATCTGTGGAA ACCATTGCTG CACGAAGTGG CGACTGGCTC TCTGGACGAA GGCGTGGATG CGCTGAGCTA TCTGGCTCAT GCGCGTAATC ATGGTTTCCA GTTCCAGCTG GGGTCGGTGA TGGATATCGA TCGCGAAGCG AAGACCATCA CCATTGCCGA GTTGCGTGAT GAAAAGGGCG AACTGCTGGT GCCGGAGCGC AAAATCGCGT ATGACACGCT GGTGATGGCG CTGGGCAGCA CCTCTAATGA TTTCAACACG CCGGGCGTGA AAGAGCACTG TATCTTCCTC GATAACCCGC ATCAGGCGCG CCGTTTTCAC CAGGAGATGC TGAACCTGTT CCTCAAGTAT TCGGCTAATC TGGGCGCGAA CGGTAAGGTC AATATCGCCA TCGTTGGCGG CGGTGCGACG GGGGTTGAGC TGTCGGCTGA ACTGCATAAT GCGGTAAAAC AGCTGCATAG CTATGGTTAT AAGGGGCTGA CCAACGACGC GCTGAACGTG ACGTTGGTTG AGGCTGGCGA GCGTATTCTG CCTGCGTTGC CGCCGCGTAT CTCCAGCGCC GCGCATAATG AACTGACCAA ACTGGGCGTT CGCGTGCTGA CGCAAACTAT GGTCACCAGC GCCGACGAAG GCGGTCTGCA TACGAAAGAA GGTGAATATA TTCAGGCCGA TCTGATGGTG TGGGCGGCGG GTATCAAAGC GCCAGATTTT ATGAAAGAGA TTGGTGGTCT GGAAACGAAC CGCATTAACC AACTGGTGGT GGAACCGACG CTGCAAACCA CGCGCGATCC TGATATTTAT GCGATTGGCG ACTGCGCTTC CTGCGCACGT CCGGAGGGAG GTTTTGTGCC GCCTCGCGCT CAGGCGGCGC ATCAGATGGC TACCTGCGCG ATGAATAACA TTCTGGCGCA GATGAATGGC AAACCGCTGA AAGCTTACCA GTATAAAGAT CATGGATCGC TGGTCTCTCT GTCCAACTTC TCTACCGTGG GTAGTCTGAT GGGGAACCTG ACCCGCGGTT CAATGATGAT TGAAGGACGT ATCGCCCGCT TCGTGTATAT CTCGCTATAC CGTATGCACC AGATAGCGCT GCATGGATAC TTTAAAACCG GCCTGATGAT GCTGGTGGGC AGTATTAACC GCGTCATTCG TCCGCGTCTG AAACTGCATT AA
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Protein sequence | MVNKFKGVTL TTPLKKIVIV GGGAGGLEMA TQLGHKLGRK KKAKITLVDR NHSHLWKPLL HEVATGSLDE GVDALSYLAH ARNHGFQFQL GSVMDIDREA KTITIAELRD EKGELLVPER KIAYDTLVMA LGSTSNDFNT PGVKEHCIFL DNPHQARRFH QEMLNLFLKY SANLGANGKV NIAIVGGGAT GVELSAELHN AVKQLHSYGY KGLTNDALNV TLVEAGERIL PALPPRISSA AHNELTKLGV RVLTQTMVTS ADEGGLHTKE GEYIQADLMV WAAGIKAPDF MKEIGGLETN RINQLVVEPT LQTTRDPDIY AIGDCASCAR PEGGFVPPRA QAAHQMATCA MNNILAQMNG KPLKAYQYKD HGSLVSLSNF STVGSLMGNL TRGSMMIEGR IARFVYISLY RMHQIALHGY FKTGLMMLVG SINRVIRPRL KLH
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