Gene SeD_A2157 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A2157 
Symbol 
ID6875301 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand- 
Start bp2070524 
End bp2071063 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content54% 
IMG OID642785263 
Producthypothetical protein 
Protein accessionYP_002215926 
Protein GI198245344 
COG category[S] Function unknown 
COG ID[COG3134] Predicted outer membrane lipoprotein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value0.000013622 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGAATAAAT CAATGTTGGC GGGTATAGGG ATTGGCGTAG CGGCTGCGCT GGGTGTGGCG 
GCAGTGGCCA GTCTCAACGT ATTTGATCGT AGTCCGCAAT ATGCGCAGGT GATATCGGCT 
AAACCGATTA AAGAGACGGT AAAAACGCCG CGTCAGGAGT GCCGTAATGT CACGGTCACG 
CATCGCAGAC CGGTTCAGGA CGAAAACCGT ATTGCCGGCT CGGTGCTTGG CGCAGTAGCA 
GGCGGCGTGA TTGGACATCA ATTTGGCGGC GGTCGTGGTA AAGATGTGGC GACGGTCGTC 
GGGGCGCTGG GCGGCGGTTA TGCTGGCAAT CAAATCCAGG GGTCAATGCA GGAAAGTGAT 
ACTTACACTA CCACGCAGCA ACGCTGTAAG ACGGTGTATG ACAAATCTGA AAAGATGCTT 
GGCTACGACG TGACCTACAA AATTGGCGAT CAGCAGGGCA AAATCCGCAT GGATAAAGAC 
CCCGGAACGC AAATTCCCCT CGACGGCAAT GGCCAACTGG TTCTGAATAA CAAAGCATAA
 
Protein sequence
MNKSMLAGIG IGVAAALGVA AVASLNVFDR SPQYAQVISA KPIKETVKTP RQECRNVTVT 
HRRPVQDENR IAGSVLGAVA GGVIGHQFGG GRGKDVATVV GALGGGYAGN QIQGSMQESD 
TYTTTQQRCK TVYDKSEKML GYDVTYKIGD QQGKIRMDKD PGTQIPLDGN GQLVLNNKA