Gene SeD_A2156 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A2156 
Symbol 
ID6872407 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand+ 
Start bp2069815 
End bp2070450 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content53% 
IMG OID642785262 
ProductTetR family transcriptional regulator 
Protein accessionYP_002215925 
Protein GI198245827 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.00000133556 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACAACGG ATACCACGAG TTGCGCGAAG AAAAGCCGTG GCCGACCAAA AGTGTTCGAC 
AGGGAAGCCG CGCTTGATAA GGCCATGACT CTCTTCTGGC AGCACGGCTA TGAAGCAACT 
TCGCTTTCCG ATCTCGTAGA GGCTACCGGG GCGAAAGCGC CTACTCTCTA TGCGGAATTC 
ACTAATAAAG AAGGATTATT TCGCGCTGTC CTGGATCGCT ACATCACTCG CTTTGCCTCA 
AAGCACGAAG CCCAGCTCTT TTGTGAAGAG AAAAGCGTGG AATCGGCACT GGAAGATTAC 
TTCACAGAAA TTGCCGCCTG CTTTACCAGT ACAGACACGC CGGCTGGCTG CTTTATGATT 
AATACGTCCG CCACCCTCGC CGCCTCCTCG CGCGATATCG CCCGCACGGT AAAATCACGC 
CACGCCATGC AGGAACAGAC GCTCATCCAG TTTCTGCGCC AACGTCAGGA GCGCGGTGAA 
ATTCCGGCGC ACTGTAACCC GCAGGCGCTC GCGGAATATA TAAACTGTAT TTTACAGGGA 
ATGTCGATCA GCGCCCGTGA AGGAGCCACC TTCGAACAAC TGATGCAAAT TACGCGTACG 
ACTCTGCGCA TCTGGCCTGA ACTACTTAAG TCCTGA
 
Protein sequence
MTTDTTSCAK KSRGRPKVFD REAALDKAMT LFWQHGYEAT SLSDLVEATG AKAPTLYAEF 
TNKEGLFRAV LDRYITRFAS KHEAQLFCEE KSVESALEDY FTEIAACFTS TDTPAGCFMI 
NTSATLAASS RDIARTVKSR HAMQEQTLIQ FLRQRQERGE IPAHCNPQAL AEYINCILQG 
MSISAREGAT FEQLMQITRT TLRIWPELLK S