Gene SeD_A2136 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A2136 
Symbol 
ID6873655 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp2048312 
End bp2049775 
Gene Length1464 bp 
Protein Length487 aa 
Translation table11 
GC content52% 
IMG OID642785242 
Productsensor protein PhoQ 
Protein accessionYP_002215905 
Protein GI198245737 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value0.062219 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAAAT TTGCTCGCCA TTTTCTGCCG CTGTCGCTGC GGGTTCGTTT TTTGCTGGCG 
ACAGCCGGCG TCGTGCTGGT GCTTTCTCTG GCATATGGCA TAGTGGCGCT GGTCGGCTAT
AGCGTAAGTT TTGATAAAAC CACCTTTCGT TTGCTGCGCG GCGAAAGCAA CCTGTTTTAT
ACCCTCGCCA AATGGGAAAA TAATAAAATC AGCGTTGAGC TGCCTGAAAA TCTGGACATG
CAAAGCCCGA CCATGACGCT GATTTACGAT GAAACGGGCA AATTATTATG GACGCAGCGC
AATATCCCCT GGCTGATTAA AAGCATTCAA CCGGAATGGT TAAAAACGAA CGGCTTCCAT
GAAATTGAAA CCAACGTAGA CGCCACCAGC ACGCTGTTGA GCGAGGACCA TTCCGCGCAG
GAAAAACTCA AAGAAGTACG TGAAGATGAC GATGATGCGG AGATGACCCA CTCGGTAGCG
GTAAATATTT ATCCTGCCAC GGCGCGGATG CCGCAGTTAA CCATCGTGGT GGTCGATACC
ATTCCGATAG AACTAAAACG CTCCTATATG GTGTGGAGCT GGTTCGTATA CGTGCTGGCC
GCCAATTTAC TGTTAGTCAT TCCTTTACTG TGGATCGCCG CCTGGTGGAG CTTACGCCCT
ATCGAGGCGC TGGCGCGGGA AGTCCGCGAG CTTGAAGATC ATCACCGCGA AATGCTCAAT
CCGGAGACGA CGCGTGAGCT GACCAGCCTT GTGCGCAACC TTAATCAACT GCTCAAAAGC
GAGCGTGAAC GTTATAACAA ATACCGCACG ACCCTGACCG ACCTGACGCA CAGTTTAAAA
ACGCCGCTCG CGGTTTTGCA GAGTACGTTA CGCTCTTTAC GCAACGAAAA GATGAGCGTC
AGCAAAGCTG AACCGGTGAT GCTGGAACAG ATCAGCCGGA TTTCCCAGCA GATCGGCTAT
TATCTGCATC GCGCCAGTAT GCGCGGTAGC GGCGTATTGT TAAGCCGCGA ACTGCATCCC
GTCGCGCCGT TGTTAGATAA CCTGATTTCT GCGCTAAATA AAGTTTATCA GCGTAAAGGG
GTGAATATCA GTATGGATAT TTCACCAGAG ATCAGTTTTG TCGGCGAGCA AAACGACTTT
GTCGAAGTAA TGGGCAACGT ACTGGACAAC GCTTGTAAAT ATTGCCTGGA GTTTGTCGAG
ATTTCGGCTC GCCAGACCGA CGATCATTTG CATATTTTCG TCGAAGATGA TGGCCCAGGC
ATTCCCCACA GTAAACGATC CCTGGTGTTT GATCGCGGTC AGCGCGCCGA TACCCTACGA
CCAGGACAAG GCGTGGGGCT GGCTGTCGCG CGCGAGATTA CGGAACAATA CGCCGGGCAG
ATCATTGCCA GCGACAGTCT GCTCGGCGGT GCCCGTATGG AGGTCGTTTT TGGCCGACAG
CACCCCACAC AGAAAGAGGA ATAA
 
Protein sequence
MNKFARHFLP LSLRVRFLLA TAGVVLVLSL AYGIVALVGY SVSFDKTTFR LLRGESNLFY 
TLAKWENNKI SVELPENLDM QSPTMTLIYD ETGKLLWTQR NIPWLIKSIQ PEWLKTNGFH
EIETNVDATS TLLSEDHSAQ EKLKEVREDD DDAEMTHSVA VNIYPATARM PQLTIVVVDT
IPIELKRSYM VWSWFVYVLA ANLLLVIPLL WIAAWWSLRP IEALAREVRE LEDHHREMLN
PETTRELTSL VRNLNQLLKS ERERYNKYRT TLTDLTHSLK TPLAVLQSTL RSLRNEKMSV
SKAEPVMLEQ ISRISQQIGY YLHRASMRGS GVLLSRELHP VAPLLDNLIS ALNKVYQRKG
VNISMDISPE ISFVGEQNDF VEVMGNVLDN ACKYCLEFVE ISARQTDDHL HIFVEDDGPG
IPHSKRSLVF DRGQRADTLR PGQGVGLAVA REITEQYAGQ IIASDSLLGG ARMEVVFGRQ
HPTQKEE