Gene SeD_A2131 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A2131 
Symbol 
ID6873777 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp2043791 
End bp2044252 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content51% 
IMG OID642785237 
ProductNUDIX family hydrolase 
Protein accessionYP_002215900 
Protein GI198246010 
COG category[L] Replication, recombination and repair
[R] General function prediction only 
COG ID[COG0494] NTP pyrophosphohydrolases including oxidative damage repair enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value0.00480915 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTTCAAGC CGCACGTGAC CGTTGCCTGC ATCGTACATG CCGAAGATAA ATTTCTGGTG 
GTGGAAGAGA CCATCAACGG TAAATCGTTA TGGAATCAAC CTGCCGGACA CCTGGAGGCA
GATGAAACGC TGGCGCAGGC CGCCGCGCGA GAACTGTGGG AAGAGACTGG CATCACGGCA
CAACCACAGT ATTTTATCCG TATGCATCAG TGGATTGCGC CGGATAAAAC CCCGTTCCTG
CGCTTTTTAT TCGCTATCAA GCTTGATCAT ATTTGCGCGA CCACCCCCCA TGACAATGAC
ATCGATTGCT GCCATTGGGT GAGCGCCGAC GAGATTCTGA ACGCGCCTAA TTTACGTTCT
CCGCTGGTGG CTGAAAGCAT TCGCAGTTAT CAAACGGGAC AACGTTACCC CTTATCTATA
GTGGGCGAAT TTAACTGGCC GTTTACAGAG GGTGTCAAGT AA
 
Protein sequence
MFKPHVTVAC IVHAEDKFLV VEETINGKSL WNQPAGHLEA DETLAQAAAR ELWEETGITA 
QPQYFIRMHQ WIAPDKTPFL RFLFAIKLDH ICATTPHDND IDCCHWVSAD EILNAPNLRS
PLVAESIRSY QTGQRYPLSI VGEFNWPFTE GVK