Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A2128 |
Symbol | icd |
ID | 6873740 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | - |
Start bp | 2041366 |
End bp | 2042616 |
Gene Length | 1251 bp |
Protein Length | 416 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 642785234 |
Product | isocitrate dehydrogenase |
Protein accession | YP_002215897 |
Protein GI | 198245823 |
COG category | [C] Energy production and conversion |
COG ID | [COG0538] Isocitrate dehydrogenases |
TIGRFAM ID | [TIGR00183] isocitrate dehydrogenase, NADP-dependent, prokaryotic type |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 0.000573381 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGAAAGCA AAGTAGTTGT TCCGGTGGAA GGTAAGAAGA TCACCCTGCA AAACGGCAAA CTCAACGTTC CTGAGAATCC GATTATCCCG TTTATTGAAG GCGATGGTAT CGGTGTTGAT GTCACTCCAG CCATGCTTAA AGTAGTCGAT GCCGCCGTCG AGAAAGCCTA TAAAGGCGAG CGTAAAATTT CCTGGATGGA AATTTACACC GGAGAAAAAT CCACACAGGT TTACGGCCAG GATGTCTGGC TTCCCGCTGA AACCCTTGAT TTAATTCGTG ACTACCGCGT AGCGATTAAA GGTCCATTGA CCACGCCGGT TGGCGGCGGT ATCCGCTCTC TGAACGTTGC CCTGCGTCAG GAGCTTGACC TGTACGTTTG TCTGCGTCCC GTTCGTTACT ATCAGGGCAC GCCAAGTCCG GTGAAACATC CGGAGCTGAC CGATATGGTC ATCTTCCGTG AAAACTCTGA AGACATCTAC GCCGGAATTG AATGGAAAGC TGACTCTGCA GACGCTGAGA AAGTGATCAA GTTCCTGCGC GAAGAGATGG GCGTGAAGAA AATTCGCTTC CCGGAGCACT GCGGTATCGG TATCAAACCG TGTTCTGAAG AAGGCACTAA ACGTCTGGTT CGCGCGGCGA TTGAATACGC TATTACCAAC GATCGCGATT CCGTCACGCT GGTACATAAA GGCAATATCA TGAAGTTCAC CGAAGGCGCG TTTAAAGACT GGGGCTACCA GTTGGCGCGC GACGAGTTCG GCGGTGAGCT TATTGACGGC GGTCCGTGGC TGAAAATTAA GAACCCGAAC ACGGGTAAAG AGATCGTGGT TAAAGACGTT ATCGCCGATG CGTTCCTGCA ACAAATCCTG TTGCGTCCGG CGGAATACGA CGTTATCGCC TGTATGAACC TGAACGGTGA CTATATTTCC GATGCCCTGG CGGCTCAGGT TGGCGGTATC GGTATTGCAC CGGGTGCGAA TATCGGCGAC GAATGCGCGT TGTTTGAAGC GACTCACGGG ACTGCGCCGA AATATGCGGG CCAGGATAAA GTCAACCCAG GCTCCATTAT TCTGTCTGCG GAGATGATGC TGCGCCACAT GCAGTGGTTC GAAGCCGCAG ACCTGATTGT TAAAGGTATG GAAGGCGCGA TTGCCGCGAA GACCGTGACC TATGACTTTG AACGCCTGAT GGAAGGCGCT AAGCTGCTGA AATGTAGTGA GTTTGGTGAC GCGATTATCG CAAATATGTA A
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Protein sequence | MESKVVVPVE GKKITLQNGK LNVPENPIIP FIEGDGIGVD VTPAMLKVVD AAVEKAYKGE RKISWMEIYT GEKSTQVYGQ DVWLPAETLD LIRDYRVAIK GPLTTPVGGG IRSLNVALRQ ELDLYVCLRP VRYYQGTPSP VKHPELTDMV IFRENSEDIY AGIEWKADSA DAEKVIKFLR EEMGVKKIRF PEHCGIGIKP CSEEGTKRLV RAAIEYAITN DRDSVTLVHK GNIMKFTEGA FKDWGYQLAR DEFGGELIDG GPWLKIKNPN TGKEIVVKDV IADAFLQQIL LRPAEYDVIA CMNLNGDYIS DALAAQVGGI GIAPGANIGD ECALFEATHG TAPKYAGQDK VNPGSIILSA EMMLRHMQWF EAADLIVKGM EGAIAAKTVT YDFERLMEGA KLLKCSEFGD AIIANM
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