Gene SeD_A2123 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A2123 
Symbol 
ID6872202 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand+ 
Start bp2036561 
End bp2037082 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content45% 
IMG OID642785231 
Productenvelope protein EnvE 
Protein accessionYP_002215894 
Protein GI198242895 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.728766 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value0.000157137 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACTTTGC TTTCAGGAAA AACCACACTG GTTCTCTGCC TCTCCTCTAT TTTATGTGGA 
TGTACGACGA ACGGCTTACC CACACCTTAT AGTATTAATT TGTCGTTCCC GGTCATTACA 
CAAAACCAGA TTAATTCCGG TGGTTATTAC ATAAATGACG CGGAACAAAT TCGGACAACT 
GATGGTCTGT GCCTTGATAC AGGCCCAGAT CAACAGAATC GTTTGACGCT GCGGGAGTGT 
AAGCATGTGC AATCTCAGCT TTTCTCATTT CACCGAGACA GAATCACGCA GGGTGAGAAA 
TGTCTGGATG CCGCAGGACA AGGTACAAAA GAAGGCACAC CAATCATTCT TTATTCATGC 
ACGGGTAATG ATAACCAGCG CTGGCTCACT GATGATAACA AAATTAAGGG GAAACAGAGC 
CGAAAATGCC TGGGCACAAA TAGCATTATT GTCAGAAAAG GCGACCCTGT TGTGTTGGCC 
GATTGCGATT TTAGTCGCGC CCTGGAATTT ACCATCAGGT AG
 
Protein sequence
MTLLSGKTTL VLCLSSILCG CTTNGLPTPY SINLSFPVIT QNQINSGGYY INDAEQIRTT 
DGLCLDTGPD QQNRLTLREC KHVQSQLFSF HRDRITQGEK CLDAAGQGTK EGTPIILYSC 
TGNDNQRWLT DDNKIKGKQS RKCLGTNSII VRKGDPVVLA DCDFSRALEF TIR