Gene SeD_A2111 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A2111 
Symbol 
ID6873502 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp2029013 
End bp2029543 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content47% 
IMG OID642785221 
Productnickel-dependent hydrogenase, B-type cytochrome subunit 
Protein accessionYP_002215886 
Protein GI198244563 
COG category[C] Energy production and conversion 
COG ID[COG3038] Cytochrome B561 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.533814 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value0.00078066 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCACATT TCTCAAGACT GCAAATAACG CTTCACTGGT TAACACTGCT CCTGACAGGC 
ATCGCATATG CTGCTATTGA GTTACGGGGG TGGGCGCCAA AAGGCTCCAG CGTTTACCTG
TTTATGAAAG ACACGCACTA TGATATGGGC GTTCTGGTCT GGGCGCTGAT GTTTTTACGG
TTATATCTTA AACACAAATA CCCGGATCCG GTCATTACGC CTCCCCCTCC TCACTGGCAG
CACGTAGCCG CTAAATTAAT GCATATCGCG CTTTATCTCA CTTTTCTCGC CTTACCGCTG
CTGGGCGTCG CGATGATGGC ATCAGGCGGG AAAAGCTGGA GCTTTTTTGG TTTTACTGTA
CCGGTATTTT TGACGCCAGA TAGCGCCCTA AAATCGGATA TAAAGCGTAT TCATGAAATG
CTGGCCAATA TCGGCTATTT CCTGATTGCC ATGCATGCAG CAGCGGCGTT GTTTCACCAT
TACATACAAA AAGATGATAC ATTTTCAAGG ATGTTACCCG GTAAATCATG A
 
Protein sequence
MAHFSRLQIT LHWLTLLLTG IAYAAIELRG WAPKGSSVYL FMKDTHYDMG VLVWALMFLR 
LYLKHKYPDP VITPPPPHWQ HVAAKLMHIA LYLTFLALPL LGVAMMASGG KSWSFFGFTV
PVFLTPDSAL KSDIKRIHEM LANIGYFLIA MHAAAALFHH YIQKDDTFSR MLPGKS