Gene SeD_A2103 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A2103 
Symbol 
ID6875534 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp2023667 
End bp2024464 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content55% 
IMG OID642785213 
ProductAdipeptide/di-oligopeptide/nickel ABC transporter ATP binding subunit 
Protein accessionYP_002215878 
Protein GI198241794 
COG category[R] General function prediction only 
COG ID[COG1123] ATPase components of various ABC-type transport systems, contain duplicated ATPase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value0.000115075 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCTAAGTT TACAACAGGT TACGCTGGAA AGCGCGCGTT ATCGCTGGTA TGGCACGAGA 
CGCTGGTCGC CGTTATTACA GAATGTCTCT TTTGATATCG CACCCGGCGA AATGGTGGCA
TTGGTTGGCG GCAGCGGGGA GGGAAAAAGT CTGCTGCTGC AATGCCTGCT CGATCTGCTG
CCGGAAAACT TACGCTTTCG GGGGGAGATT ACGCTTGATG GCAACCGGCT GGACAGACAT
ACCATCAGGC AGCTTAGGGG CAATACGTTT AGCTACGTGC CGCAGGGGGT ACAGGCGCTT
AATCCCATGC TGAATATCAG AAAACATTTG AACAGAGCAT GTCATCTGAC CGGACGCGCC
TGGGATGAGA CGCAGATGGT ACAGCTATTA CAGCAAAGCG ATCTTGAACC GACAGTCCTG
GAACGCTTTC CCCGCCAGCT CTCTGGCGGG ATGGCTAAAC GAATTCTGGC GTGCCACGCC
TCGCTCAGCC AGGCTCGTTA TATCCTCGCG GATGAGATCA CCGCCTGGCT TGATACCGCA
CTGGCAAACC AGTTGCTTGA GCACTTGCGA GGTCTCTGCG AGCGGGGATG CGGCGTGCTG
TGGGTGACTC ATGACCTGCT GCTGGCGGCG CGGTATGCCG ATCGCATTGT GGCGCTGCAT
CAGGGTTATA TCACGGACAA TATCCGCTGC GAGCAGTTAC AGCCGGAAGA GATGAGTGAG
CCGTTAAAAC GGCAATGGCA AGCATTGCCT GAACTAAACC CGTTATTTAT GCCGACCGGA
GAGGGAATAG AATGCTGA
 
Protein sequence
MLSLQQVTLE SARYRWYGTR RWSPLLQNVS FDIAPGEMVA LVGGSGEGKS LLLQCLLDLL 
PENLRFRGEI TLDGNRLDRH TIRQLRGNTF SYVPQGVQAL NPMLNIRKHL NRACHLTGRA
WDETQMVQLL QQSDLEPTVL ERFPRQLSGG MAKRILACHA SLSQARYILA DEITAWLDTA
LANQLLEHLR GLCERGCGVL WVTHDLLLAA RYADRIVALH QGYITDNIRC EQLQPEEMSE
PLKRQWQALP ELNPLFMPTG EGIEC