Gene SeD_A2095 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A2095 
Symbol 
ID6874752 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand- 
Start bp2017952 
End bp2018800 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content47% 
IMG OID642785206 
Productputative transcriptional regulator 
Protein accessionYP_002215872 
Protein GI198246020 
COG category[K] Transcription 
COG ID[COG0789] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones1 
Plasmid unclonability p-value0.000221737 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.000000256129 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCTACTT TTAGTATTAG CGCAATGGCG GCGCAGTGTG GTGTCACAAC AGCAAATATC 
AGGTCCTGGG AACGCTATGG CCTGCTCCAA CCTATCAAAG ATGAAGCTGG CAATCGTTTT 
TATTGCATAG AAGATGCTAT CAGAATACAG CATATTATCG ACGCGTTAAG TAAAGGCTTC 
TCATTAAAAG AGATTAAACC TGCCCTCTAT GGTGAAGAAA CGCATTGCCG CTCGGGATGG 
TTATTCTACC AGGAAGAGAT TTTAGCGCAG TGTAGAAAAT TCGAACCCGC CAAATTGCGA 
AAATTACTCT GGCGTTATGG TCGGGAAATT CCGCCGTGTA TCGTAATTGA GTCAATACTG 
CGTCCTTTAC GGCTGTGGTT GTCCGCAGGC GATGATGATG CACGCCGATT TGAAAAGGCA 
TTACTGGATA CTGCGATTAT TGAATACGCC ACGTTCCAGC TAAGTAGCGT ACGAAAGGCG 
CCAGCAGGCA CAATGCTTAT TGCTGCGTTT TCGCTGAACG ACCCCATTGA GCTATGGCTG 
GAAACGATTA AATATTGTAG TGAAGGTATG CGAGTTGAAG TCATCCCCTG GCAGGCGCCG 
ATGCCCGATC TTTTATCAAC GTCTTTCGAG CATATTGTTC TGTGGCATGA TGAGACATTA 
ACTCCCGCGC AGGAAAATCT TATTCAGGCT TTAAAAGAGT CGGGTAAATT TAGTCTTCAT 
GTGAAAAATG GCTCAGGCTT AACATTACTG CCAGCCGTAT ACCGGCAGCA TGAGATGCCC 
GAAAGCATGC AGCATGTTGC ACCGCAAATC CATGCAAACG GCTACGAAAA ATCAGGCACC 
GCACGTTGA
 
Protein sequence
MATFSISAMA AQCGVTTANI RSWERYGLLQ PIKDEAGNRF YCIEDAIRIQ HIIDALSKGF 
SLKEIKPALY GEETHCRSGW LFYQEEILAQ CRKFEPAKLR KLLWRYGREI PPCIVIESIL 
RPLRLWLSAG DDDARRFEKA LLDTAIIEYA TFQLSSVRKA PAGTMLIAAF SLNDPIELWL 
ETIKYCSEGM RVEVIPWQAP MPDLLSTSFE HIVLWHDETL TPAQENLIQA LKESGKFSLH 
VKNGSGLTLL PAVYRQHEMP ESMQHVAPQI HANGYEKSGT AR