Gene SeD_A2093 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A2093 
Symbol 
ID6871250 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp2016589 
End bp2017134 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content47% 
IMG OID642785204 
Productchorismate mutase 
Protein accessionYP_002215870 
Protein GI198242798 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1605] Chorismate mutase 
TIGRFAM ID[TIGR01806] chorismate mutase, putative 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00333633 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.000000577582 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGATTCGTC ATATCGCCAT TTTTCTTTGT TCTTTATTGA TGTGCAGCAC CACTTTTGCC 
GATTCGGTAA CGTCGGTATC GCTTGGCGCG CTCTTAACCG CGCTCAATGA ACGCATGTTA
TTAATGAAAG ATGTGGCTGC TTATAAAATG AAGCACCATC TGCCGATAGA GGATTTCACA
CGTGAACAAA ATGTTTTTGC CGAGGCTGAA GAAGAAGCGA AAAATAACGG TCTGGACCCG
CATTCGATAA CCCCTTTTAT TCGTTCGCTA ATGGATGCCA GTAAAGCGAT ACAGTACCGC
TATTTAGCGC AGTGGCGAAC CGGCTCAGAA CCCTCCTTTC CGATACAAAC CTTGTCGGTC
ACCCGGCAAC GTATTCGACA ACTTGATAAT CAAATGTTGA TCATTATCAG CCAGCGCTTG
ATGGTCGGCG CTTTCAGCCA CGACGATATG GTGTGGCTGA GAGCGCAGTT TAATGCGCCG
AATCTGAATG AGAGCGATAT CAGTAATGTG TTGGCAGCCT TATCTTTGGT GCGACGCGCG
CGTTAA
 
Protein sequence
MIRHIAIFLC SLLMCSTTFA DSVTSVSLGA LLTALNERML LMKDVAAYKM KHHLPIEDFT 
REQNVFAEAE EEAKNNGLDP HSITPFIRSL MDASKAIQYR YLAQWRTGSE PSFPIQTLSV
TRQRIRQLDN QMLIIISQRL MVGAFSHDDM VWLRAQFNAP NLNESDISNV LAALSLVRRA
R