Gene SeD_A2088 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A2088 
Symbol 
ID6875801 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand- 
Start bp2014162 
End bp2014803 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content51% 
IMG OID642785199 
Producthypothetical protein 
Protein accessionYP_002215865 
Protein GI198243324 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.595726 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.0000066098 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAACTCG ATACCCGATT AACTTCGTCA GCACTTACTC TTGCGCTTGC CGCTGTGGTC 
ATCCCGTTTA CGGCGGACTG GCAATTGCCT TTGCTTAACG GCGTGGTGGT CCGATGGATT 
GAAAACGGAC AAGCGTTATG GTTACTGTTT GGGGCGCTAT TTACCGCCTG GTATATACGG 
CCACTTTCCC GTCCCGAAGG GGCAAAGCAG TTTTGGCTAT GGGCTGTTGT CTGGTGGGTG 
GTGCTATTGG GTAGAAGCAC CAGTTGGGGG CGTGACTATA TCCCTGACGA GCCGCGTATG 
CTGTTCAGAA CGATTTCAGT GCTATTAATT GCTGCGTTAG TCTTGCCAGT CCTGTTTTCT 
GCCGGGCTCC GTAAGGAGAT TGTTCGTCGC CTACGGGACG CTCCTCTGCC ATTGTGGCTG 
TTTACCGTGA CGGCATGTTC ATATCTGATT TCCGACACTG TCGAGCATCA TCGGTGGTTG 
TCGCCGATAT TCCTGCATAA CGCTCGTTAC ACAGATTTGA TTGAAGAGCT TTATGAAGTG 
CCATTTATGA TCGGTTTGTT TATGGTGACC GTGGTGTTTA TGCAGCAGGA CAAGCAGGAT 
GAATGTACGG CGCTGGAGAT GACCCCGTAT CACGCAAAAT AG
 
Protein sequence
MKLDTRLTSS ALTLALAAVV IPFTADWQLP LLNGVVVRWI ENGQALWLLF GALFTAWYIR 
PLSRPEGAKQ FWLWAVVWWV VLLGRSTSWG RDYIPDEPRM LFRTISVLLI AALVLPVLFS 
AGLRKEIVRR LRDAPLPLWL FTVTACSYLI SDTVEHHRWL SPIFLHNARY TDLIEELYEV 
PFMIGLFMVT VVFMQQDKQD ECTALEMTPY HAK