Gene SeD_A2083 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A2083 
Symbol 
ID6874558 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp2012916 
End bp2013167 
Gene Length252 bp 
Protein Length83 aa 
Translation table11 
GC content57% 
IMG OID642785195 
Producthypothetical protein 
Protein accessionYP_002215861 
Protein GI198244944 
COG category[R] General function prediction only 
COG ID[COG3042] Putative hemolysin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value0.0000368011 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAATTTA CGTGGATTGC GTTGCCAGGC GTATTGCTGC TGAGCGCTTG TTCATCGTCG 
CAACCCAACG CCCCCCGGCC GCCGCGCATT GGGATGCCTA ATCCGGCAGC CGTCTACTGT
GAGCAACAGG GCGGTACGCT GATGCCGGTG CAGACCCCAC AAGGCGTGCG TTCCGATTGC
AAATTGCCCA ATGGCGAAAT CATTGATGAG TGGGCATTAT GGCGCAGAGA GCACCCTGAT
ACGAAAAAGT GA
 
Protein sequence
MKFTWIALPG VLLLSACSSS QPNAPRPPRI GMPNPAAVYC EQQGGTLMPV QTPQGVRSDC 
KLPNGEIIDE WALWRREHPD TKK