Gene SeD_A2070 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A2070 
Symbol 
ID6872605 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand- 
Start bp2002052 
End bp2002798 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content51% 
IMG OID642785183 
ProductMltA-interacting protein 
Protein accessionYP_002215849 
Protein GI198242440 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3713] Outer membrane protein V 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value0.000515947 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGACCAAAC TTAAACTTCT GGCTCTTGGC GTGTTTATTG CAACATCCGC CAGCGTCGCG 
CACGCTGAAA GCAACCTGAC GTTGGGCGCA GGCGTTGGTG TGGTTGAACA CCCTTATAAA 
GATTACGATA GCGATGTTTA TCCGATACCG GTCATCGCTT ATGAAAGCGA AAACTTCTGG 
TTCCGTGGTC TGGGCGGCGG GTATTACTTG TGGAATGACA ATGCCGATAA GTTGTCAATC 
ATGGCATACT GGTCCCCGAT GTACTTCAAA CCGGGCGACA GCGATGACCA TCAGTTGCGT 
CGTCTGGACA GGCGTAAAAG TACTATGATG GCGGGCGTTT CTTACGCGCA TCACACCCAG 
TATGGATTCC TGCGTACCTC ACTGGCAGGG GATACGTTGG ATAACAGTAA CGGTATTGTC 
TGGGATCTGG CCTGGCTGTA TCGGTATACC AATGGCGGGC TGACCTTAAC GCCAGGTATC 
GGGGTTGAAT GGAATAGCGA GAACCAGAAC GATTACTATT ACGGCGTATC ACGTAAAGAA 
TCTTCGCGTA GCGGCCTGCG CGGCTATAAC CCGAACGATA GCTGGAACCC GTATCTTGAA 
CTTAGCGCTA ACTATAATTT CGCCGGTAAC TGGAGCGTAT ATGGTACTGC GCGCTACACC 
CGCCTGTCGG ATGAAATTAC CGACAGCCCG ATGGTGGATA AATCCTGGAC CGGTATCCTT 
TCTACTGGCG TGACCTATAG ATTCTGA
 
Protein sequence
MTKLKLLALG VFIATSASVA HAESNLTLGA GVGVVEHPYK DYDSDVYPIP VIAYESENFW 
FRGLGGGYYL WNDNADKLSI MAYWSPMYFK PGDSDDHQLR RLDRRKSTMM AGVSYAHHTQ 
YGFLRTSLAG DTLDNSNGIV WDLAWLYRYT NGGLTLTPGI GVEWNSENQN DYYYGVSRKE 
SSRSGLRGYN PNDSWNPYLE LSANYNFAGN WSVYGTARYT RLSDEITDSP MVDKSWTGIL 
STGVTYRF