Gene SeD_A2052 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A2052 
SymbolansA 
ID6875154 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp1984813 
End bp1985829 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content53% 
IMG OID642785166 
Productcytoplasmic asparaginase I 
Protein accessionYP_002215832 
Protein GI198242806 
COG category[E] Amino acid transport and metabolism
[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0252] L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D 
TIGRFAM ID[TIGR00519] L-asparaginases, type I 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones55 
Fosmid unclonability p-value0.160149 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAAAGA AATCAATTTA CGTTGCCTAT ACCGGCGGTA CTATCGGTAT GCAGCGCTCA 
GATAAAGGGT ATATCCCGGT GTCCGGGCAC CTTCAGCGCC AGCTGGCGCT GATGCCGGAA
TTCCACCGCC CGGAGATGCC GGATTTTACC ATCCATGAAT ATGCCCCGCT GATGGATTCA
TCAGATATGA CGCCGGAAGA CTGGCAGCAT ATCGCTGAAG ATATCAAAGC GCACTACGAT
GAGTATGACG GTTTTGTTAT TCTGCACGGC ACCGACACGA TGGCGTATAC CGCATCGGCG
CTCTCTTTCA TGCTGGAAAA TCTGGGTAAA CCGGTTATTG TGACAGGGTC ACAAATTCCG
CTGGCTGAGC TGCGCTCCGA CGGGCAAATT AATTTGCTGA ATGCGCTTTA TGTCGCCGCC
AACTATCCTG TTAATGAAGT AACGCTGTTT TTTAATAATC GTCTGTTCCG CGGCAATCGC
ACGACCAAAG CCCATGCGGA TGGTTTTGAC GCTTTTGCCT CTCCTAATCT GCCGCCCTTG
CTGGAAGCAG GAATTCACAT TCGCCGTTTA AATACGCCTC CCGCGCCCTA CGGTTCTGGT
GAATTAATCG TTCACCCTAT TACGCCGCAG CCGATAGGCG TAGTGACGAT TTATCCGGGG
ATTTCCGCCG AGGTAGTACG TAACTTTCTG CGTCAGCCGG TAAAAGCGCT GATTCTGCGC
TCTTATGGCG TAGGCAACGC GCCGCAAAAT AAAGCGTTTT TACAGGAGCT GAAAGAGGCC
AGTTCGCGCG GCATCGTGGT GGTTAACCTG ACGCAATGCA TGTCAGGGCG AGTCAATATG
GGCGGGTACG CTACCGGTAA TGCGCTGGCG CACGCTGGCG TGATTGGCGG TGCCGATATG
ACCGTCGAAG CCACCTTAAC CAAACTGCAT TATTTGTTAA GCCAGGGTCT GGACACTCAG
GCGATTCGTA GCGCGATGGC GCAAAACTTG CGTGGTGAAT TGACGCCGGA TGATTAA
 
Protein sequence
MQKKSIYVAY TGGTIGMQRS DKGYIPVSGH LQRQLALMPE FHRPEMPDFT IHEYAPLMDS 
SDMTPEDWQH IAEDIKAHYD EYDGFVILHG TDTMAYTASA LSFMLENLGK PVIVTGSQIP
LAELRSDGQI NLLNALYVAA NYPVNEVTLF FNNRLFRGNR TTKAHADGFD AFASPNLPPL
LEAGIHIRRL NTPPAPYGSG ELIVHPITPQ PIGVVTIYPG ISAEVVRNFL RQPVKALILR
SYGVGNAPQN KAFLQELKEA SSRGIVVVNL TQCMSGRVNM GGYATGNALA HAGVIGGADM
TVEATLTKLH YLLSQGLDTQ AIRSAMAQNL RGELTPDD