Gene SeD_A2050 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A2050 
Symbol 
ID6872638 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand- 
Start bp1982136 
End bp1982687 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content57% 
IMG OID642785164 
Producthypothetical protein 
Protein accessionYP_002215830 
Protein GI198243847 
COG category[C] Energy production and conversion 
COG ID[COG0778] Nitroreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.658191 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones60 
Fosmid unclonability p-value0.425687 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATGCAC TAGAACTGCT GGTCAACCGT CGTAGCGCCT CTCGTCTCGC AGAACCGGCG 
CCTGTCGGAG AGCAATTACA GAACATTCTG CGGGCGGGAA TGCGTGTTCC CGATCATAAA 
TCTCTACAGC CGTGGCGTTT TTTTGTGATT GAAGGAGAGG GGCGCGACCG CTTCAGCGCC 
GTGCTTGAAC AAGGCGCTGT CGCTGCCGGG GGCGATGAGA AAGCGATCGA AAAAGCGCGT 
AATGCGCCGT TTCGCGCGCC GCTGATCATT ACCGTGGTGG CGAAATGCGA AGAAAACCAT 
AAGGTTCCGG TGTGGGAACA GGAGATGTCT GCCGGATGCG CGGTGATGGC GATGCAAATG 
GCGGCGATTG CGCAAGGGTT TAATGGTATC TGGCGTAGCG GCGCATTAAC GGAGAGCGCT 
ATCGTGCGGG AAGCCTTTGA GTGCCGCCCG CAGGATAAAA TTGTTGGTTT TCTCTATCTC 
GGCACGCCGC AGCTCAAAGC GTCAACGACG ATCAGTACCC CCGACCCCAC GCCGTTTGTG 
CGTTATTTCT GA
 
Protein sequence
MDALELLVNR RSASRLAEPA PVGEQLQNIL RAGMRVPDHK SLQPWRFFVI EGEGRDRFSA 
VLEQGAVAAG GDEKAIEKAR NAPFRAPLII TVVAKCEENH KVPVWEQEMS AGCAVMAMQM 
AAIAQGFNGI WRSGALTESA IVREAFECRP QDKIVGFLYL GTPQLKASTT ISTPDPTPFV 
RYF