Gene SeD_A2028 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A2028 
Symbol 
ID6870996 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp1961328 
End bp1962683 
Gene Length1356 bp 
Protein Length451 aa 
Translation table11 
GC content48% 
IMG OID642785142 
Product6-phospho-beta-glucosidase 
Protein accessionYP_002215808 
Protein GI198246086 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1486] Alpha-galactosidases/6-phospho-beta-glucosidases, family 4 of glycosyl hydrolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones70 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCAGA AATTAAAAGT CGTCACTATT GGTGGCGGGA GCAGCTACAC CCCTGAATTA 
CTTGAAGGCT TTATTAAACG CTACCATGAA TTACCTGTCA CTGAATTATG GCTGGTTGAC
GTTGAAGACG GGAAAGAGAA GCTGGGCATT ATTTATGATC TCTGCCAGCG AATGATTGAT
AAAGCAGGCG TTCCGCTAAA ATTGTATAAA ACGCTGGATC GCCGGGAAGC GCTGAAAGAC
GCTAATTTTG TTACTACCCA GCTACGCGTT GGTCAACTCA AAGCCCGTGA ACTGGACGAG
CGTATCCCGC TTAGTCACGG CTATCTGGGG CAAGAAACCA ACGGCGCTGG CGGTTTATTT
AAAGGGTTGC GTACCATTCC GGTTATTTTT GACATCATTA AGGATGTTGA AGAATTATGT
CCGAATGCGT GGGTCATTAA CTTTACTAAT CCGGCAGGGA TGGTGACGGA AGCGGTTTAT
CGTCATACCA ACTTTAAAAA GTTCATTGGC GTATGTAATA TTCCTGTCGG CATGAAAATG
TTTATTCATG ACGTGCTGGC GCTGAATGAG ACTGACGATC TTTCCATTGA CCTGTTTGGT
CTAAACCATA TGGTCTTTAT TAAAGATGTG CTGGTGAATG GCACCTCACG GTTCGCAGAA
TTACTGGATG GCGTGGCGCC CGGTCAGTTG AAAGCGTCAA CCGTAAAAAA TATCTTTGAT
CTGCCGTTTA GTGAAGGATT GATTCGCTCG CTGAACATGC TGCCGTGCTC TTATTTGTTG
TATTACTTCA AGCAAAAAGA GATGTTGGCG ATTGAAATGG GCGAATATTA CAAAGGCGGC
GCGCGCGCTC AGGTCGTACA AAAAGTGGAG AAACAACTCT TCGACTTGTA CAAAAATCCT
GAGCTAAACG TGAAGCCGAA AGAGCTTGAG CAACGCGGCG GCGCTTATTA TTCCGATGCC
GCTTGTGAAG TCATTAACGC TATTTATAAT GACAAGCAGA CTGAGCATTA CGTTAATATT
CCACATCATG GGCATGTCGA GAATATCCCG GCGGACTGGG CGGTGGAAAT GACCTGCATT
CTGGGACGCA ATGGCGCGAC GCCGCACCCG CGTATCACCC GTTTTGACGA AAAAGTGCTG
GGGCTTATCC ACACTATTAA AGGATTTGAG GTCGCGGCCA GCAATGCGGC GCTGAGCGGA
AACTTTAATG ATGTGCTGCT GGCGCTTAAC CTGAGTCCGC TGGTGCATTC CGACCGCGAC
GCAGAAGTCC TGGCGCGTGA GCTCATTCTG GCGCATGAAA AATGGCTGCC TAATTTTGCC
GCTTGCATCG AAGCGCTTAA AGGTAAGCAC CACTGA
 
Protein sequence
MSQKLKVVTI GGGSSYTPEL LEGFIKRYHE LPVTELWLVD VEDGKEKLGI IYDLCQRMID 
KAGVPLKLYK TLDRREALKD ANFVTTQLRV GQLKARELDE RIPLSHGYLG QETNGAGGLF
KGLRTIPVIF DIIKDVEELC PNAWVINFTN PAGMVTEAVY RHTNFKKFIG VCNIPVGMKM
FIHDVLALNE TDDLSIDLFG LNHMVFIKDV LVNGTSRFAE LLDGVAPGQL KASTVKNIFD
LPFSEGLIRS LNMLPCSYLL YYFKQKEMLA IEMGEYYKGG ARAQVVQKVE KQLFDLYKNP
ELNVKPKELE QRGGAYYSDA ACEVINAIYN DKQTEHYVNI PHHGHVENIP ADWAVEMTCI
LGRNGATPHP RITRFDEKVL GLIHTIKGFE VAASNAALSG NFNDVLLALN LSPLVHSDRD
AEVLARELIL AHEKWLPNFA ACIEALKGKH H