Gene SeD_A2027 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A2027 
Symbol 
ID6871820 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand- 
Start bp1960557 
End bp1961315 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content54% 
IMG OID642785141 
Producthypothetical protein 
Protein accessionYP_002215807 
Protein GI198241790 
COG category[S] Function unknown 
COG ID[COG3394] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.747309 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones72 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACGCG TGTTGATTGT GAATGCCGAT GATTTTGGCC TGAGTAAAGG GCAAAATTAC 
GGCATTGTTG AAGCATATCG CAACGGCGTT GTGACCTCCA CGACGGCGCT GGTCAATGGC 
GAGGCTATTG ACCATGCGGC GCAGCTTAGC CGCGAGCTGC CTGCGCTTGG GGTGGGAATG 
CATTTTGTTT TGACGTTAGG CAAACCGGTG TCAGAGATGC CGGGCCTGAC GCGAGACGGC 
CTGTTGGGGA AATGGATCTG GCAAATGGCG GAGGAGGATA CGCTTCCGCT GGATGAAATT 
GCGCATGAAC TGGCGTGTCA GTATCAGCGT TTCATCGACG TATTTGGCCG CGAGCCAACG 
CATCTCGACA GTCACCATCA TGTGCATATG TTCCCGCAAA TTTTCCCCAT CGTCGCCCAC 
TTTGCGGCGC AGCGCGGGAT TGCGTTACGT ATTGACCGCC AGACGGTGTT GAACGCCGAC 
GATCTGCCGT CGGATTTGCG CAGCACTCAA GGATTTAGTA GTGAATTTTA CGGCGAGGAG 
ATCACCGAAG CGTGCTTTTT ACGCATTCTG GATGCCTCGG CGCATCGAGG AGAAGCCTCT 
CTGGAGGTGA TGTGTCATCC GGCGTTTGTG GATAACATTA TTCGCCAGAG CGCCTATTGC 
TACCCCCGCT TAACTGAACT GGAGGTGTTG ACGTCTGCGT CACTCAAGGC AGCGATTGCG 
GAACGTGGAT ATCGTCCTGG CAGTTTTCTT GATATTTAG
 
Protein sequence
MERVLIVNAD DFGLSKGQNY GIVEAYRNGV VTSTTALVNG EAIDHAAQLS RELPALGVGM 
HFVLTLGKPV SEMPGLTRDG LLGKWIWQMA EEDTLPLDEI AHELACQYQR FIDVFGREPT 
HLDSHHHVHM FPQIFPIVAH FAAQRGIALR IDRQTVLNAD DLPSDLRSTQ GFSSEFYGEE 
ITEACFLRIL DASAHRGEAS LEVMCHPAFV DNIIRQSAYC YPRLTELEVL TSASLKAAIA 
ERGYRPGSFL DI