Gene SeD_A2023 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A2023 
Symbol 
ID6874816 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp1955423 
End bp1956022 
Gene Length600 bp 
Protein Length199 aa 
Translation table11 
GC content53% 
IMG OID642785137 
Producthypothetical protein 
Protein accessionYP_002215803 
Protein GI198244414 
COG category[R] General function prediction only 
COG ID[COG1988] Predicted membrane-bound metal-dependent hydrolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones72 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTTTTA TCATGACGGC GGAAGGACAT CTTCTTTTTT CTATAGCCAG CGCGGTTTTC 
GCCAAGAATG CCGAGTTAAC GCCCGTCCTT GCGCACGGCG ACTGGTGGCA TATTATTCCT
TCGGCTATTT TGACCTGTCT GCTGCCGGAT ATCGACCACC CCAAATCTTT TCTTGGTCAG
CGCCTGAAAT GGGTATCGAA ACCGATCGCC CGCGCGTTTG GTCACCGGGG GTTTACCCAT
AGTCTGCTGG CGGTCTTTGC CCTACTGGCG ACCTTTTATC TCAAGGTTCC GGATACGTGG
ATCATCCCGG CGGATGCGCT GCAAGGCATG GTACTCGGCT ATTTAAGCCA TATCGTCGCG
GATATGCTCA CCCCCGCAGG CGTTCCCTTA CTGTGGCCGT GCCGCTGGCG TTTCCGCCTG
CCTATTCTGG CGCCGCGCAA AGGCAATCAA CTGGAGCGAT TTTTATGCAT GGCGTTGTTT
GCCTGGGCGG TGTGGATGCC ACAGTCCATG CCGGAAAACA ACGTCATACG CTGGTCTTCG
CAGATGATTA CTATCCTGCA AATGCAGTTC AATCGTTTTA TAAATCACCA GATTGATTAG
 
Protein sequence
MGFIMTAEGH LLFSIASAVF AKNAELTPVL AHGDWWHIIP SAILTCLLPD IDHPKSFLGQ 
RLKWVSKPIA RAFGHRGFTH SLLAVFALLA TFYLKVPDTW IIPADALQGM VLGYLSHIVA
DMLTPAGVPL LWPCRWRFRL PILAPRKGNQ LERFLCMALF AWAVWMPQSM PENNVIRWSS
QMITILQMQF NRFINHQID