| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A2017 |
|---|
| Symbol | |
|---|
| ID | 6875074 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011205 |
|---|
| Strand | - |
|---|
| Start bp | 1950557 |
|---|
| End bp | 1951282 |
|---|
| Gene Length | 726 bp |
|---|
| Protein Length | 241 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 642785131 |
|---|
| Product | putative outer membrane protein |
|---|
| Protein accession | YP_002215797 |
|---|
| Protein GI | 198244884 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG3137] Putative salt-induced outer membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.277986 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 72 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGGCGG GTGGCGTGTT CGCGTCTCTG TATGCCGCCG CCGATGATTC CGTTTTTACT
GTCATGGATG ATCCCTCCAC CGCGAAAAAA CCTTTTGAAG GTAATCTGAA TGCGGGCTAC
CTTGCTCAGT CAGGCAATAC TAAAAGTTCT TCCTTAACGG CTGACACGGC GATGACCTGG
TATGGACAAC GTACCGCCTG GTCATTATGG GGCAATGCCA GCAATACCTC CTCTAATGAT
GAACGCTCTT CAGAAAAATA TGCGGTAGGC GCGCGTAACC GTTTTAATAT GACGGATTAT
GATTATACCT TTGACCAGGC CAGTTGGCTG ACAGACCGTT TCAACGGTTA TCGTCAGCGC
GACGTACTGA CCGCCGGTTA CGGGCGGCAG TTCCTTAATG GTCCAGTGCA CAGCTTCCGT
TTTGAATTTG GTCCAGGGGT TCGCTATGAC GAACATACGG ACGATACCAC TGAAACGCAG
CCGTTGGGTT ATGCTTCCGG CAGCTATGCC TGGCAGTTAA CTGACAATGC TAAGTTTACA
CAGGGGGTGT CAGTATTTGG CGCAGAAGAC ACCACACTAA ATTCGGAAAC AGCCCTCAAT
GTCGCCATTA ACGAACATTT TGGTCTAAAG GTGGGGTATA ATTTAACGTG GAACTCGCAG
CCGCCTGAAT CAGCGCCTGA ACATACCGAT CGTCGCACTA CGGTAACGCT GGGCTATAAG
ATGTAA
|
|---|
| Protein sequence | MLAGGVFASL YAAADDSVFT VMDDPSTAKK PFEGNLNAGY LAQSGNTKSS SLTADTAMTW
YGQRTAWSLW GNASNTSSND ERSSEKYAVG ARNRFNMTDY DYTFDQASWL TDRFNGYRQR
DVLTAGYGRQ FLNGPVHSFR FEFGPGVRYD EHTDDTTETQ PLGYASGSYA WQLTDNAKFT
QGVSVFGAED TTLNSETALN VAINEHFGLK VGYNLTWNSQ PPESAPEHTD RRTTVTLGYK
M
|
|---|
| |