Gene SeD_A2014 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A2014 
Symbol 
ID6872245 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp1948242 
End bp1949096 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content51% 
IMG OID642785129 
ProductDNA/RNA non-specific endonuclease 
Protein accessionYP_002215795 
Protein GI198242131 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1864] DNA/RNA endonuclease G, NUC1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000025013 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones74 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAATAAAA CCATTAATCT GCTAAAATTA CTGCCCGTAG TATTATTAAG CGCATGTACT 
ACATCGTATC CTCCCCAGGA TATAATATCG GCACCCGAGT TACCCCATCG TAACGTACTC
GTTCAGCAAC CTGATAACTG TAGCGTTGGC TGTCCTCAAG GAGGAAGTCA ACAAACAATC
TATCGCCATG TCTATACGCT CAATAATAAT AGCGCCACGA AATTTGCCAA CTGGGTTGCC
TATAGCGTGA CAAAGACCAG CCAGGCAAGC GGTCGCCCGC GGAACTGGGC GCAGGACCCC
GATTTACCGC CCTCGGATAC GTTGGCCCCT TCGGCCTATA AAAATGCCCA TACGCTATTA
AAAGTCGACA GGGGACACCA GGCGCCGTTG GCAGGATTGG GCGGCGTTTC GGACTGGCCG
TCGTTAAATT ATTTATCGAA TATTACGCCG CAGAAATCCG CCCTGAACCA GGGAGCATGG
GCTGCACTGG AAAACCGGGT GCGCGAACTT GCCAAACAGG CTGATGTATC TGTAGTGCAC
GTAGTGACCG GCCCCCTTTT TGAGCGGCAT ATCGCCACAT TGCCAGAAGA TGCGACGGTA
GAAATTCCCA GCGGGTACTG GAAGGTTTTA TTCACCGGAA CGGCGCCGTC AAAAAGTGAA
GGAAATTACG CTGCGTTTAT TATGGATCAG AATACGCCCC GTTCGGCGAA TTTTTGCGAC
TATCAGGTTA CCGTGGAGGC TATCGAACAT AAAACGAAGC CAGTGCTGAC GCTGTGGTCT
GCCTTGCCTG AAGCGGTAGC CAGCGAGGTG AAAACGACAA AGGGGAGTCT GGCGCAGAAG
TTAGGTTGTC GATGA
 
Protein sequence
MNKTINLLKL LPVVLLSACT TSYPPQDIIS APELPHRNVL VQQPDNCSVG CPQGGSQQTI 
YRHVYTLNNN SATKFANWVA YSVTKTSQAS GRPRNWAQDP DLPPSDTLAP SAYKNAHTLL
KVDRGHQAPL AGLGGVSDWP SLNYLSNITP QKSALNQGAW AALENRVREL AKQADVSVVH
VVTGPLFERH IATLPEDATV EIPSGYWKVL FTGTAPSKSE GNYAAFIMDQ NTPRSANFCD
YQVTVEAIEH KTKPVLTLWS ALPEAVASEV KTTKGSLAQK LGCR