| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A2002 |
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| Symbol | |
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| ID | 6872129 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011205 |
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| Strand | - |
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| Start bp | 1935154 |
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| End bp | 1935618 |
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| Gene Length | 465 bp |
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| Protein Length | 154 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 642785117 |
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| Product | putative lipoprotein nlpC |
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| Protein accession | YP_002215783 |
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| Protein GI | 198245732 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0791] Cell wall-associated hydrolases (invasion-associated proteins) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 61 |
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| Fosmid unclonability p-value | 0.303201 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCGTTTTT GGCTTCTTGT TATCACAGCA TTGTTCCTGG CAGGATGCAG TACTCATCGG
GCACCGGCGC CAAATGCCAG ATTATCAGAC TCCATTACCG TCATTGCGGG TCTGAACGAT
CAGTTGCAGT CCTGGCGCGG TACGCCATAC CGTTACGGCG GCATGAGTCG CAGAGGCGTG
GACTGTTCCG GCTTTGTGGT GGTCACTATG CGCGACAAGT TTGATTTGCA GTTGCCTCGT
GATACGCGTG AACAATCAAA AATCGGCACC AGAATCGATA AAGATGAATT GCTGCCCGGG
GATTTGGTTT TCTTTAAAAC CGGTTCGGGC GAAAGTGGTT TACATGTTGG TATTTACGAT
ACAAATAATG AGTTTATTCA TGCCTCTACC AGTCGTGGCG TGATGCGTTC ATCGCTGGAT
AATGTGTACT GGCGAAAAAA CTTCTGGCAG GCACGGCGAA TTTAA
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| Protein sequence | MRFWLLVITA LFLAGCSTHR APAPNARLSD SITVIAGLND QLQSWRGTPY RYGGMSRRGV
DCSGFVVVTM RDKFDLQLPR DTREQSKIGT RIDKDELLPG DLVFFKTGSG ESGLHVGIYD
TNNEFIHAST SRGVMRSSLD NVYWRKNFWQ ARRI
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