Gene SeD_A1997 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A1997 
Symbol 
ID6871578 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand+ 
Start bp1930205 
End bp1931038 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content51% 
IMG OID642785112 
Producthypothetical protein 
Protein accessionYP_002215778 
Protein GI198241764 
COG category[S] Function unknown 
COG ID[COG1806] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones57 
Fosmid unclonability p-value0.140597 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATAATG TTGTTGATCG CCATGTTTTC TATATTTCTG ATGGTACCGC CATCACCGCC 
GAGGTCCTGG GTCACGCAGT TATGTCGCAG TTTCCGGTGA CGATCAGCAG CATCACGCTG 
CCATTCGTGG AAAACGAAAG TCGCGCCCGC GCCGTCAAAG ACCAAATTGA CGCCATTTAT 
CAGCAAACCG GCGTTCGCCC GCTGGTGTTT TACTCGATTG TTTTACCTGA AATTCGCGCC 
ATCATCTTAC AGAGCGAAGG TTTCTGCCAG GATATCGTCC AGGCGCTGGT GGCGCCGCTT 
CAGCAGGAGA TGAAACTGGA TCCGACGCCG ATCGCTCATC GTACTCATGG GCTTAATCCG 
GGTAACCTGA ACAAGTATGA CGCGCGTATT GCCGCTATCG ATTATACCCT GGCGCATGAT 
GATGGCATTT CATTGCGCAA CCTCGATCAG GCCCAGGTCA TTTTACTTGG CGTTTCGCGC 
TGTGGAAAAA CGCCCACCAG CCTCTATCTG GCAATGCAAT TCGGTATTCG TGCGGCTAAC 
TACCCTTTCA TCGCCGATGA TATGGATAAT TTGACGCTGC CCACATCGTT AAAACCGCTA 
CAACATAAAC TGTTCGGCCT GACAATTGAC CCTGAACGCT TGGCGGCTAT TCGCGAAGAA 
CGCCGTGAAA ACAGTCGCTA TGCCTCGTTG CGTCAGTGCC GCATGGAAGT GGCAGAGGTC 
GAAGCGCTGT ATCGTAAAAA TCAGATCCCC TGCCTGAACA GCACCAATTA TTCCGTTGAA 
GAGATAGCCA CCAAGATTCT CGATATTATG GGGCTTAACC GCAGGATGTA CTAG
 
Protein sequence
MDNVVDRHVF YISDGTAITA EVLGHAVMSQ FPVTISSITL PFVENESRAR AVKDQIDAIY 
QQTGVRPLVF YSIVLPEIRA IILQSEGFCQ DIVQALVAPL QQEMKLDPTP IAHRTHGLNP 
GNLNKYDARI AAIDYTLAHD DGISLRNLDQ AQVILLGVSR CGKTPTSLYL AMQFGIRAAN 
YPFIADDMDN LTLPTSLKPL QHKLFGLTID PERLAAIREE RRENSRYASL RQCRMEVAEV 
EALYRKNQIP CLNSTNYSVE EIATKILDIM GLNRRMY