Gene SeD_A1958 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A1958 
Symbol 
ID6874494 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp1887579 
End bp1888601 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content55% 
IMG OID642785078 
Producttetrathionate reductase complex, subunit C 
Protein accessionYP_002215744 
Protein GI198244750 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3301] Formate-dependent nitrite reductase, membrane component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.413721 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.000000744183 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACGCATT CACTCATCAT TGAAGAAGTG CTGGCTCACC CGCAGGACAT TAGTTGGCTG 
CCGTGGGCGG TACAATATTT CTTTTTTATT GGCATTGCCG CCTGCGCCGC ACTGTTTGCC
TGTTATCTTC ACTGGCGGAA AAAAGACGCC GCAACAGAAG AAAATCGGGC ATTACTGATT
GCCATTACCT GTGCGATTAC CGCACCGCTG GCGCTGACGG CGGATCTGCA CCAGACTGCC
CGCGTCTGGC ATTTCTATGC CTGGCCGACG CCCTGGTCGT GGATGCCCTG GGGAGCGTTG
TTCCTGCCGC TGTTTACCGG ATTTCTCGCT CTGTGGTTCC TGGCGCAGCA GATTAAACGA
TTATTCAATA AAAGTTACAA CGTCACTAAA TGGTTGGCGT TAGCCAGCGC GCTTTGCGCG
GTGGGCCTGT TGATTTATAC CGGCCGCGAA GTCTCCGTTG TGCTGGCGCG CCCAATCTGG
TTTAGCTACG CCTTCCCCGT GGCGATGTTC CTTAGCGCCT TACAGGCGTT CTTCGCGCTG
ATGATTGTCG CCGCCCGACG CGACTCGGTA AGGCTGCCAA AAATATTGTG GGGACAAATC
TGGACGCTGG CGGCGCTGGG GCTGGTTGTG GCCATGTGGG TTAGCGGCGA TACGCTTTCC
GGCACGGCAA TCCGTCAGTG GATTACCGTC GCCCTGTCAG CCAAATATTA CGCTGTCGGC
TGGCTAGCGC TGTGGGTATT CACGCTGCTG TTCTGTAGCC TGACGCTACG TCATCCGTTA
TCGCAGCTAA GACGCGTCCT GCTGGTTCTC AGCGCGCTGG CGCTATGTTG GCTGATGCGC
TGGACATTGT TGATTCAGGT ACAAACCGTC CCCAAGTTCA ACGCGCAATT TAACCCTTAC
TCGTTACCAG GCGGAACGGA TGGCTGGCTG GCTATTCTCG GCACCTTCGG CCTGTGGATA
GCGCTACTGA TTATTATTCG TGAAACGCTG AACGGACTCA CCAGGAGATT ACAACATGGC
TAA
 
Protein sequence
MTHSLIIEEV LAHPQDISWL PWAVQYFFFI GIAACAALFA CYLHWRKKDA ATEENRALLI 
AITCAITAPL ALTADLHQTA RVWHFYAWPT PWSWMPWGAL FLPLFTGFLA LWFLAQQIKR
LFNKSYNVTK WLALASALCA VGLLIYTGRE VSVVLARPIW FSYAFPVAMF LSALQAFFAL
MIVAARRDSV RLPKILWGQI WTLAALGLVV AMWVSGDTLS GTAIRQWITV ALSAKYYAVG
WLALWVFTLL FCSLTLRHPL SQLRRVLLVL SALALCWLMR WTLLIQVQTV PKFNAQFNPY
SLPGGTDGWL AILGTFGLWI ALLIIIRETL NGLTRRLQHG