| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A1956 |
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| Symbol | |
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| ID | 6871032 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011205 |
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| Strand | - |
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| Start bp | 1884884 |
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| End bp | 1886632 |
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| Gene Length | 1749 bp |
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| Protein Length | 582 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 642785076 |
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| Product | sensor-kinase |
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| Protein accession | YP_002215742 |
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| Protein GI | 198242180 |
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| COG category | [P] Inorganic ion transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG3221] ABC-type phosphate/phosphonate transport system, periplasmic component
[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.0000433243 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGTTGGCGG CAGTAGGGCT ACTTTGTCAT GGCGCGTGGG CAGGGACGTG GAATATCGGT
ATTTTGGCCA TGCGCGGCGA GGCGTCTACG CGTAGCCACT GGCAACCGTT GGCAAAGACA
TTAAGCCAAC AGTTTCCAGG CGAAACCTTT CATATCCAGC CGCTGGATCT GCATCAAATG
CAGGAAGCCG TTAACCAGGG AACCGTGCAG TTTGTGATAA CCAACCCGGC GCAATTTGTC
CAACTGAACA GCCATGCGCC GCTGCGCTGG TTAGCTTCCC TGCGTTCCAC GCGCGATGGG
AAAGCGGTGA GTAATGTTAT TGGCAGCGTG ATTTTGACCC GGCGCGATAG CGGCATCACC
ACGGCGCATG ATCTCATCGG TAAGACAGTC GGCGCGATTG ATGCTCAGGC GTTTGGCGGC
TATTTATTAG GCTATAAAGC GCTCAGCGAC GCGGGCTTAC GCCCGGAGCG CGATTTTCAT
CTTCGTTTTA CCGGATTTCC TGGCGATGCC TTAGTCTATA TGCTGCGCGA AAAAGCGGTG
CAGGCGGCAA TTGTGCCAGT GTGCCTGTTA GAAAATATGG ATCAGGAAGG ATTGATTAAT
AAAAAGGACT TTATCGCGCT GCTTTCCCGA CCGACGCCAC TGCCTTGCTT AACCAGTACG
CCGTTATATC CTGACTGGTC GTTCGCGGCG CTACCTGCGG TAAGCGATGC GCTGGCGGAT
CGCGTAACGC GAGCGCTATT CAACGCGCCC GCCGCCGCGT CATTTCACTG GGGCGCGCCA
GCGTCGACCA GTCAGGTGGA AGCTTTGCTG CGTGATGTTC GTCAGCACCC TCAGCAGCGC
CGACTGTGGC TGGATGTCAA AAGTTGGTTA ATCCAGCACC AGCTAATGGT CGGTGGCGTG
ATTCTGGCGT TCCTGTTGCT CACGCTCAAT TATATTTGGG TCATGCTGCT GGTGCGTCGA
CGCGGAAAAC AACTGGAACG TAATAATGTA GTCCTTCATC AGCATGAGCG GGCGCTGGAA
ACCGCCCGGC AAATGAGCGT GTTGGGTGAA ATGACCTCCG GGTTTGCCCA TGAGCTTAAT
CAGCCGCTTT CCGCGATTCG ACATTATGCC CAGGGGTGCC TGATTCGACT GCGCGCTGCA
GATGAACAGC ATCCCTTGCT GCCGGCGCTG GAGCAGATTG ACCAGCAGGC GCAACGCGGT
GCGGATACTC TGCGTAACCT GCGTCACTGG GTCAGCCAGG CGCAGGGCAA CCCGGTGCTA
ACCGAAGCGT GGAAGGCCAT AGCCATTCGC GAGGCGATTG ATCATGTCTG GCAATTGTTG
CGTATGGCGC AACAGTTTCC GACAGTGACT CTGCATACCG AGGTTAGCGC TGCGCTGCGC
GTAACGCTGC CGTCAGTGCT GCTGGAACAG GTGCTGGCGA ATATCATTCT TAATGCGGCT
CAGGCGGGCG CCACCCATTT ATGGGTCGTT GCTGAACGCA CTGAACACGG CATCAGTATC
GCTTTACAGG ATAACGCCGG GGGAATCGAT GAGGCGCTAT TACGTCAGGC GTTTCAGCCG
TTTATGACCA CCCGCAAAGA GGGGATGGGC TTAGGGCTGG CGATTTGCCA GCGGCTGGTG
CGGTATGGGC GGGGCGATAT CAGTATCAGG AACCAGACCG CGCCGGACGG TCTGTCGGGA
ACGGTGGTCA CGATACATTT CTTACATGAA AATGGGGGCA GGGATGGCGA CAATTCATCT
ACTGGATGA
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| Protein sequence | MLAAVGLLCH GAWAGTWNIG ILAMRGEAST RSHWQPLAKT LSQQFPGETF HIQPLDLHQM
QEAVNQGTVQ FVITNPAQFV QLNSHAPLRW LASLRSTRDG KAVSNVIGSV ILTRRDSGIT
TAHDLIGKTV GAIDAQAFGG YLLGYKALSD AGLRPERDFH LRFTGFPGDA LVYMLREKAV
QAAIVPVCLL ENMDQEGLIN KKDFIALLSR PTPLPCLTST PLYPDWSFAA LPAVSDALAD
RVTRALFNAP AAASFHWGAP ASTSQVEALL RDVRQHPQQR RLWLDVKSWL IQHQLMVGGV
ILAFLLLTLN YIWVMLLVRR RGKQLERNNV VLHQHERALE TARQMSVLGE MTSGFAHELN
QPLSAIRHYA QGCLIRLRAA DEQHPLLPAL EQIDQQAQRG ADTLRNLRHW VSQAQGNPVL
TEAWKAIAIR EAIDHVWQLL RMAQQFPTVT LHTEVSAALR VTLPSVLLEQ VLANIILNAA
QAGATHLWVV AERTEHGISI ALQDNAGGID EALLRQAFQP FMTTRKEGMG LGLAICQRLV
RYGRGDISIR NQTAPDGLSG TVVTIHFLHE NGGRDGDNSS TG
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