Gene SeD_A1955 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A1955 
Symbol 
ID6872810 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand- 
Start bp1884289 
End bp1884909 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content55% 
IMG OID642785075 
Productresponse regulator 
Protein accessionYP_002215741 
Protein GI198241824 
COG category[T] Signal transduction mechanisms 
COG ID[COG4566] Response regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value0.00159918 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCGACAA TTCATCTACT GGATGATGAT ACGGCGGTCA CTAACGCGTG CGCGTTTTTA 
CTGGAAAGTC TGGGATATGA CGTAAAATGC TGGACGCAGG GGGCGGATTT TTTGGCGCAG 
GCCAGTCTGT ATCAGGCCGG GGTCGTATTA CTGGATATGC GAATGCCGGT ACTGGATGGG 
CAGGGCGTTC ATGATGCGTT GCGCCAGTGC GGAAGTACCC TGGCGGTTGT TTTTCTTACC 
GGGCATGGCG ATGTACCGAT GGCCGTGGAG CAGATGAAAC GCGGCGCCGT CGATTTTCTG 
CAAAAACCGG TATCGGTAAA ACCGCTACAG GCGGCGCTGG AGCGTGCGCT GACGGTTTCA 
TCGGCAGCGG TGGCGCGTCG TGAGATTATA CTGTGTTACC AGCAGTTGAC GCCGAAAGAG 
CGTGAGCTGG CCAGCCTGGT GGCAAAAGGA TTTATGAACC GTGAAATTGC GGAAGCGATG 
AATATCGCGG TGCGTACCGT AGAGGTGCAC CGCGCCAGAG TCATGGAAAA AATGCAGGCC 
GGTAGCCTGG CGGAACTGAT TAGGCGTTTC GAAAAAATGG CCTCGCCAGA GACCAGAATA 
CGAACAACGT ATGAGCCATG A
 
Protein sequence
MATIHLLDDD TAVTNACAFL LESLGYDVKC WTQGADFLAQ ASLYQAGVVL LDMRMPVLDG 
QGVHDALRQC GSTLAVVFLT GHGDVPMAVE QMKRGAVDFL QKPVSVKPLQ AALERALTVS 
SAAVARREII LCYQQLTPKE RELASLVAKG FMNREIAEAM NIAVRTVEVH RARVMEKMQA 
GSLAELIRRF EKMASPETRI RTTYEP